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Species

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Genomic sequences

  • vein_scaffold.fsa.gz (9.50 MB) V. inaequalis Draft Supercontigs sequences (v1)
  • Vevg_Avr_region.fsa.gz (99.79 kB) Vg Avr region (330Kb)
  • vein_scaffold_v4.fsa.gz (18.70 MB) V. inaequalis v4 Supercontigs sequences
  • vein_ctg_v4.fsa.gz (18.37 MB) V. inaequalis v4 contigs sequences (virtual contigs extracted from supercontigs after final assembly they are separated by gap of at least one nucleotide N)
  • Vein_allest1.fsa.gz (9.81 MB) V. inaequalis v1 ESTs (38486 ESTs from
    • AQDA: V. inaequalis in vitro on Vogel
    • AQDB: V. inaequalis 10 days infection leaves
    • AQDC: V. inaequalis under carbon starvation
    • AQDD: V. inaequalis under nitrogen starvation

Genes

  • Vein_CDSall_nuc.fsa.zip (4.39 MB)  V. inaequalis v4 predicted CDS (12558):
    It contains reliable (10426) and unreliable (2132) Eugene predicted CDS
    Vein_Pxxxxxx.1 : gene with length > 300 Nucl OR (gene with length < 300 aa with EST Evidence)
    Vein_uPxxxxxx.1 : gene with length < 300 aa without EST evidence (at the time of prediction pipeline)
  • Vein_CDSall_prot.fsa.zip (2.80 MB)  V. inaequalis v4 predicted proteins (12558):
    It contains reliable (10426) and unreliable (2132) Eugene predicted protein
    Vein_Pxxxxxx.1 : protein with length > 100 aa OR (protein with length < 100 aa with EST Evidence)
    Vein_uPxxxxxx.1 : protein with length < 100 aa without EST evidence (at the time of prediction pipeline)

 

Annotation files

 

  Supplementary downloads

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Update: 23 Oct 2013
Creation date: 14 Oct 2010