22 Parents
| Identifier | Name | Description |
|---|---|---|
| GO:0005737 | cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| GO:0005622 | intracellular | The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. |
| GO:0005875 | microtubule associated complex | Any multimeric complex connected to a microtubule. |
| GO:0043234 | protein complex | A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical. |
| GO:0008352 | katanin complex | A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa). |
| GO:0005856 | cytoskeleton | Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles. |
| GO:0005815 | microtubule organizing center | An intracellular structure that can catalyze gamma-tubulin-dependent microtubule nucleation and that can anchor microtubules by interacting with their minus ends, plus ends or sides. |
| GO:0044424 | intracellular part | Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm. |
| GO:0005623 | cell | The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope. |
| GO:0032991 | macromolecular complex | A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together. |
| GO:0044464 | cell part | Any constituent part of a cell, the basic structural and functional unit of all organisms. |
| GO:0005575 | cellular_component | The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together. |
| GO:0044444 | cytoplasmic part | Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. |
| GO:0044422 | organelle part | Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane. |
| GO:0044446 | intracellular organelle part | A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane. |
| GO:0043226 | organelle | Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane. |
| GO:0043229 | intracellular organelle | Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane. |
| GO:0043228 | non-membrane-bounded organelle | Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes. |
| GO:0043232 | intracellular non-membrane-bounded organelle | Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes. |
| GO:0044430 | cytoskeletal part | Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice. |
| GO:0015630 | microtubule cytoskeleton | The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins. |
| GO:0044450 | microtubule organizing center part | Any constituent part of a microtubule organizing center, a region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow. |
2 Protein
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0120020.2 | Quercus robur | 96.0 | egn | (M=1) PTHR19845//PTHR19845:SF0 - KATANIN P80 SUBUNIT // SUBFAMILY NOT NAMED | validated | ||
| Qrob_P0162310.2 | Quercus robur | 100.0 | egn | (M=1) KOG0263//KOG0266//KOG0267//KOG0271//KOG0272//KOG0274//KOG0285//KOG0292//KOG0295//KOG0305 - Transcription initiation factor TFIID subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]. // WD40 repeat-containing protein [General function prediction only]. // Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control cell division chromosome partitioning]. // Notchless-like WD40 repeat-containing protein [Function unknown]. // U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]. // Cdc4 and related F-box and WD-40 proteins [General function prediction only]. // Pleiotropic regulator 1 [RNA processing and modification]. // Vesicle coat complex COPI alpha subunit [Intracellular trafficking secretion and vesicular transport]. // WD40 repeat-containing protein [Function unknown]. // Anaphase promoting complex Cdc20 Cdh1 and Ama1 subunits [Cell cycle control cell division chromosome partitioning Posttranslational modification protein turnover chaperones]. | validated |
27 Relations
| Relationship |
Parent Term . Identifier |
Child Term . Identifier |
|---|---|---|
| is_a | GO:0044450 | GO:0008352 |
| is_a | GO:0005875 | GO:0008352 |
| is_a | GO:0044430 | GO:0008352 |
| part of | GO:0005737 | GO:0008352 |
| is_a | GO:0032991 | GO:0008352 |
| part of | GO:0043226 | GO:0008352 |
| part of | GO:0005856 | GO:0008352 |
| part of | GO:0005575 | GO:0008352 |
| is_a | GO:0044424 | GO:0008352 |
| part of | GO:0043232 | GO:0008352 |
| is_a | GO:0005575 | GO:0008352 |
| is_a | GO:0044422 | GO:0008352 |
| part of | GO:0044422 | GO:0008352 |
| part of | GO:0044424 | GO:0008352 |
| part of | GO:0043229 | GO:0008352 |
| part of | GO:0043228 | GO:0008352 |
| is_a | GO:0043234 | GO:0008352 |
| is_a | GO:0044444 | GO:0008352 |
| is_a | GO:0044446 | GO:0008352 |
| part of | GO:0015630 | GO:0008352 |
| part of | GO:0044464 | GO:0008352 |
| part of | GO:0044446 | GO:0008352 |
| part of | GO:0005815 | GO:0008352 |
| part of | GO:0005623 | GO:0008352 |
| part of | GO:0005622 | GO:0008352 |
| part of | GO:0044430 | GO:0008352 |
| is_a | GO:0044464 | GO:0008352 |
