Protein : Qrob_P0367550.2 Q. robur
Protein Identifier  ? Qrob_P0367550.2 Organism . Name  Quercus robur
Score  18.2 Score Type  egn
Protein Description  (M=1) PTHR24092:SF55 - PHOSPHOLIPID-TRANSPORTING ATPASE TAT-1 (PTHR24092:SF55) Code Enzyme  EC:3.6.3.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 819  
Kegg Orthology  K14802
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0 Synonyms

8 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0004012 phospholipid-translocating ATPase activity Catalysis of the movement of phospholipids from one membrane bilayer leaflet to the other, driven by the hydrolysis of ATP.
GO:0015914 phospholipid transport The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100815547 166 503 + 338 Gaps:87 34.31 1227 69.12 0.0 phospholipid-transporting ATPase 3-like
blastp_kegg lcl|pvu:PHAVU_003G072200g 166 503 + 338 Gaps:87 38.98 1080 68.17 0.0 hypothetical protein
blastp_kegg lcl|vvi:100264484 166 503 + 338 Gaps:87 35.59 1183 70.55 0.0 phospholipid-transporting ATPase 3-like
blastp_kegg lcl|mtr:MTR_8g062150 166 503 + 338 Gaps:87 34.74 1212 69.12 0.0 Phospholipid-transporting ATPase
blastp_kegg lcl|cmo:103489061 166 503 + 338 Gaps:87 34.34 1226 70.78 0.0 phospholipid-transporting ATPase 3
blastp_kegg lcl|cam:101506046 166 503 + 338 Gaps:87 34.56 1218 68.17 1e-180 phospholipid-transporting ATPase 3-like
blastp_kegg lcl|pda:103716981 166 503 + 338 Gaps:87 34.23 1230 68.17 1e-180 phospholipid-transporting ATPase 3
blastp_kegg lcl|pop:POPTR_0010s04910g 166 492 + 327 Gaps:87 33.94 1208 71.71 1e-180 POPTRDRAFT_230718 putative phospholipid-transporting ATPase 3 family protein
blastp_kegg lcl|gmx:100787473 166 503 + 338 Gaps:87 34.31 1227 67.70 5e-180 phospholipid-transporting ATPase 3-like
blastp_kegg lcl|csv:101207069 166 503 + 338 Gaps:87 34.31 1227 69.83 5e-178 phospholipid-transporting ATPase 3-like
blastp_pdb 3izr_s 481 670 + 190 none 59.56 319 74.74 2e-80 mol:protein length:319 60S acidic ribosomal protein P0 (L10p)
blastp_pdb 2zkr_g 518 669 + 152 none 47.95 317 58.55 9e-52 mol:protein length:317 60S acidic ribosomal protein P0
blastp_pdb 3j16_G 520 665 + 146 none 46.79 312 50.68 2e-42 mol:protein length:312 60S ribosomal protein L10
blastp_pdb 3izs_s 520 665 + 146 none 46.79 312 50.68 2e-42 mol:protein length:312 60S acidic ribosomal protein rpP0 (L10P)
blastp_pdb 3o5h_M 520 665 + 146 none 46.79 312 50.68 2e-42 mol:protein length:312 60S acidic ribosomal protein P0
blastp_pdb 3u5i_q 520 665 + 146 none 46.79 312 44.52 3e-32 mol:protein length:312 60S acidic ribosomal protein P0
blastp_pdb 3a1y_G 509 657 + 149 Gaps:1 52.82 284 36.00 4e-17 mol:protein length:284 Acidic ribosomal protein P0
blastp_pdb 3i56_G 509 661 + 153 Gaps:1 44.25 348 29.22 3e-15 mol:protein length:348 50S ribosomal protein L10E
blastp_pdb 3i55_G 509 661 + 153 Gaps:1 44.25 348 29.22 3e-15 mol:protein length:348 50S ribosomal protein L10E
blastp_pdb 3g71_G 509 661 + 153 Gaps:1 44.25 348 29.22 3e-15 mol:protein length:348 50S ribosomal protein L10E
blastp_uniprot_sprot sp|Q9XIE6|ALA3_ARATH 166 503 + 338 Gaps:87 34.71 1213 67.70 2e-177 Phospholipid-transporting ATPase 3 OS Arabidopsis thaliana GN ALA3 PE 1 SV 2
blastp_uniprot_sprot sp|P50346|RLA0_SOYBN 481 670 + 190 none 59.38 320 79.47 2e-94 60S acidic ribosomal protein P0 OS Glycine max PE 1 SV 1
blastp_uniprot_sprot sp|O04204|RLA01_ARATH 481 670 + 190 none 59.94 317 76.84 2e-90 60S acidic ribosomal protein P0-1 OS Arabidopsis thaliana GN RPP0A PE 1 SV 1
blastp_uniprot_sprot sp|Q42112|RLA02_ARATH 481 670 + 190 none 59.38 320 75.79 1e-89 60S acidic ribosomal protein P0-2 OS Arabidopsis thaliana GN RPP0B PE 1 SV 2
blastp_uniprot_sprot sp|P57691|RLA03_ARATH 481 670 + 190 none 58.82 323 75.79 2e-89 60S acidic ribosomal protein P0-3 OS Arabidopsis thaliana GN RPP0C PE 1 SV 1
blastp_uniprot_sprot sp|Q9LI83|ALA10_ARATH 174 497 + 324 Gaps:85 33.86 1202 42.51 2e-83 Phospholipid-transporting ATPase 10 OS Arabidopsis thaliana GN ALA10 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SX33|ALA9_ARATH 174 491 + 318 Gaps:84 33.33 1200 42.00 2e-82 Putative phospholipid-transporting ATPase 9 OS Arabidopsis thaliana GN ALA9 PE 3 SV 1
blastp_uniprot_sprot sp|P57792|ALA12_ARATH 174 498 + 325 Gaps:83 34.46 1184 40.69 4e-81 Putative phospholipid-transporting ATPase 12 OS Arabidopsis thaliana GN ALA12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SAF5|ALA11_ARATH 174 497 + 324 Gaps:87 34.00 1203 41.32 7e-81 Putative phospholipid-transporting ATPase 11 OS Arabidopsis thaliana GN ALA11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LK90|ALA8_ARATH 175 494 + 320 Gaps:89 34.40 1189 41.32 1e-80 Putative phospholipid-transporting ATPase 8 OS Arabidopsis thaliana GN ALA8 PE 3 SV 1

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 705 767 63 G3DSA:3.30.830.10 none none IPR011237
SUPERFAMILY 177 344 168 SSF56784 none none IPR023214
TIGRFAM 270 364 95 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
Phobius 398 426 29 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 427 447 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 448 471 24 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 377 397 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 174 501 328 PTHR24092:SF55 none none none
Phobius 351 376 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 329 329 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 671 759 89 PF05193 none Peptidase M16 inactive domain IPR007863
Phobius 472 491 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 330 350 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 74 174 101 PF00254 none FKBP-type peptidyl-prolyl cis-trans isomerase IPR001179
ProSiteProfiles 65 188 124 PS50059 none FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. IPR001179
SUPERFAMILY 138 173 36 SSF54534 none none none
PANTHER 174 501 328 PTHR24092 none none IPR006539
Phobius 492 818 327 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 344 492 149 SSF81665 none none none
Gene3D 75 175 101 G3DSA:3.10.50.40 none none none
Gene3D 268 350 83 G3DSA:3.40.50.1000 none none IPR023214
Gene3D 209 222 14 G3DSA:3.40.50.1000 none none IPR023214
SUPERFAMILY 712 803 92 SSF63411 none none IPR011249

4 Localization

Analysis Start End Length
TMHMM 378 397 19
TMHMM 469 491 22
TMHMM 427 449 22
TMHMM 341 363 22

20 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting