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Species

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Genomic sequences

  • LM_supctg_v2.fsa.gz (12.72 MB) L. maculans Supercontigs sequences
  • LM_ctg_v2.fsa.gz (12.70 MB) L. maculans contigs sequences (virtual contigs extracted from supercontigs after final assembly they are separated by gap of at least one nucleotide N)
  • LM_bes.fsa.gz (5.99 MB) L. maculans Bac End Sequences

Genes (last update 06 february 2012, with 142 new gene predictions, 2 partials without sequence in fasta files)

  • LM_orfnucall_1.fsa.gz (4.84 MB) L. maculans predicted genes:
    It contains reliable and unreliable Eugene predicted gene (without UTRs)
    Lema_Pxxxxxx.1 : gene with length > 300 Nucl OR (gene with length < 300 aa with EST Evidence)
    Lema_uPxxxxxx.1 : gene with length < 300 aa without EST evidence (at the time of prediction pipeline))
  • lm_supctg_v2.genecds.gff.gz (936.19 kB) GFF file for predicted genes (without UTRs)
  • LM_orfprotall_1.fsa.gz (3.14 MB) L. maculans predicted protein:
    It contains reliable and unreliable Eugene predicted protein
    Lema_Pxxxxxx.1 : protein with length > 100 aa OR (protein with length < 100 aa with EST Evidence)
    Lema_uPxxxxxx.1 : protein with length < 100 aa without EST evidence (at the time of prediction pipeline))
  • lm_supctg_v2.gene.gff.gz (981.28 kB) GFF file for predicted genes (including UTRs)

Transposable Elements

Supplementary downloads

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Update: 06 Jun 2014
Creation date: 12 Oct 2010