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Forest trees

Forest trees

As part of the Forest tree GnpIS project, several forest trees species and their associated data can be found in GnpIS .

These data are provided by different sources (projects and networks) listed on this page .

 

Data overview

Data for Castanea, Fraxinus, Picea, Pinus, Populus, Quercus, Salix and Ulmus species are available in GnpIS.

Their access is free Public access or restricted Registered access .

 

Genome sequencing and annotation overview

  Blast Genome Browser
717-1B4 draft genome sequence Public access  
Populus trichocarpa V1   Public access Registered access
Populus trichocarpa V2   Public access
Populus trichocarpa V3   Public access

Genetic and genomic data overview on 05/05/2017

  #Total #Public #Private
Genetic Resources
Public access Registered access
Taxon 186 186 0
Accession 25234 15024 10210
Phenotyping
Public access Registered access
Trial 25 24 1
Lot 2591 526 2065
Variable 47 42 7
Observation 1477205 50689 1426516
Genotyping
Public access
Experiment 5 5 0
Lot 384 384 0
Marker 13756 13756 0
Sequence
Public access
Experiment 1 1 0
Sequence 82 82 0
Analysis 0 0 0
Polymorphism
Public access Registered access
Analysis 10 9 1
Sequence Variation 588438 416567 171871
Polymorphic loci 165 165 0
SNP marker 165 165 0
Genetic Map
Public access Registered access
Map 33 29 4
Marker 7587 7088 505
QTL 1022 723 299
Update: 10 May 2017
Creation date: 19 Aug 2014
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