Protein : Qrob_P0761730.2 Q. robur
Protein Identifier  ? Qrob_P0761730.2 Organism . Name  Quercus robur
Score  81.1 Score Type  egn
Protein Description  (M=1) KOG0944//KOG1863//KOG1865//KOG1867//KOG1868//KOG1870//KOG1873//KOG2026 - Ubiquitin-specific protease UBP14 [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin C-terminal hydrolase [Posttranslational modification protein turnover chaperones]. // Ubiquitin-specific protease [Posttranslational modification protein turnover chaperones]. // Spindle pole body protein - Sad1p [Cytoskeleton]. Code Enzyme  EC:3.4.19.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 590  
Kegg Orthology  K11835
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0004843 ubiquitin-specific protease activity Catalysis of the thiol-dependent hydrolysis of a peptide bond formed by the C-terminal glycine of ubiquitin.
GO:0036459 ubiquitinyl hydrolase activity Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin.

48 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101227614 60 543 + 484 Gaps:5 96.98 496 80.04 0.0 ubiquitin carboxyl-terminal hydrolase 5-like
blastp_kegg lcl|cmo:103501691 60 535 + 476 Gaps:3 50.27 941 80.97 0.0 ubiquitin carboxyl-terminal hydrolase 5
blastp_kegg lcl|pmum:103342897 60 535 + 476 Gaps:7 50.80 943 80.58 0.0 ubiquitin carboxyl-terminal hydrolase 5
blastp_kegg lcl|csv:101215135 60 535 + 476 Gaps:4 50.21 940 81.14 0.0 ubiquitin carboxyl-terminal hydrolase 5-like
blastp_kegg lcl|pper:PRUPE_ppa001039mg 73 535 + 463 Gaps:2 49.78 926 82.21 0.0 hypothetical protein
blastp_kegg lcl|pxb:103952631 67 535 + 469 Gaps:6 49.73 935 80.00 0.0 ubiquitin carboxyl-terminal hydrolase 5-like
blastp_kegg lcl|pxb:103952615 67 535 + 469 Gaps:6 49.73 935 80.00 0.0 ubiquitin carboxyl-terminal hydrolase 5-like
blastp_kegg lcl|mdm:103428698 62 535 + 474 Gaps:6 50.27 935 79.15 0.0 ubiquitin carboxyl-terminal hydrolase 5-like
blastp_kegg lcl|pop:POPTR_0006s03230g 60 535 + 476 Gaps:4 50.05 951 78.15 0.0 POPTRDRAFT_560337 PIGMENT DEFECTIVE EMBRYO 323 family protein
blastp_kegg lcl|cic:CICLE_v100137951m 60 535 + 476 Gaps:7 66.15 709 78.68 0.0 hypothetical protein
blastp_pdb 2y6e_F 384 533 + 150 Gaps:1 41.14 367 63.58 3e-58 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_E 384 533 + 150 Gaps:1 41.14 367 63.58 3e-58 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_D 384 533 + 150 Gaps:1 41.14 367 63.58 3e-58 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_C 384 533 + 150 Gaps:1 41.14 367 63.58 3e-58 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_B 384 533 + 150 Gaps:1 41.14 367 63.58 3e-58 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 2y6e_A 384 533 + 150 Gaps:1 41.14 367 63.58 3e-58 mol:protein length:367 UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 4
blastp_pdb 3n3k_A 356 535 + 180 Gaps:9 44.19 396 44.00 2e-36 mol:protein length:396 Ubiquitin carboxyl-terminal hydrolase 8
blastp_pdb 2gfo_A 356 535 + 180 Gaps:9 44.19 396 44.00 2e-36 mol:protein length:396 Ubiquitin carboxyl-terminal hydrolase 8
blastp_pdb 2ibi_A 372 533 + 162 Gaps:15 43.05 374 42.24 4e-30 mol:protein length:374 Ubiquitin carboxyl-terminal hydrolase 2
blastp_pdb 3nhe_A 384 533 + 150 Gaps:14 43.10 348 44.67 2e-29 mol:protein length:348 Ubiquitin carboxyl-terminal hydrolase 2
blastp_uniprot_sprot sp|O22207|UBP5_ARATH 60 535 + 476 Gaps:10 50.43 924 76.39 0.0 Ubiquitin carboxyl-terminal hydrolase 5 OS Arabidopsis thaliana GN UBP5 PE 1 SV 2
blastp_uniprot_sprot sp|Q93Y01|UBP9_ARATH 75 535 + 461 Gaps:32 47.58 910 51.73 5e-134 Ubiquitin carboxyl-terminal hydrolase 9 OS Arabidopsis thaliana GN UBP9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZSB5|UBP10_ARATH 74 535 + 462 Gaps:31 47.13 923 51.49 7e-134 Ubiquitin carboxyl-terminal hydrolase 10 OS Arabidopsis thaliana GN UBP10 PE 2 SV 2
blastp_uniprot_sprot sp|Q9MAQ3|UBP11_ARATH 75 535 + 461 Gaps:42 48.54 892 48.50 8e-118 Putative ubiquitin carboxyl-terminal hydrolase 11 OS Arabidopsis thaliana GN UBP11 PE 3 SV 2
blastp_uniprot_sprot sp|Q9C585|UBP8_ARATH 89 535 + 447 Gaps:53 48.22 871 45.24 5e-98 Ubiquitin carboxyl-terminal hydrolase 8 OS Arabidopsis thaliana GN UBP8 PE 1 SV 2
blastp_uniprot_sprot sp|P35123|UBP4_MOUSE 95 533 + 439 Gaps:35 43.87 962 41.23 5e-81 Ubiquitin carboxyl-terminal hydrolase 4 OS Mus musculus GN Usp4 PE 1 SV 3
blastp_uniprot_sprot sp|Q8R5H1|UBP15_MOUSE 85 533 + 449 Gaps:46 43.12 981 40.43 2e-80 Ubiquitin carboxyl-terminal hydrolase 15 OS Mus musculus GN Usp15 PE 1 SV 1
blastp_uniprot_sprot sp|B2GUZ1|UBP4_RAT 95 533 + 439 Gaps:35 43.91 961 40.76 3e-80 Ubiquitin carboxyl-terminal hydrolase 4 OS Rattus norvegicus GN Usp4 PE 1 SV 1
blastp_uniprot_sprot sp|Q9Y4E8|UBP15_HUMAN 85 533 + 449 Gaps:46 43.12 981 40.43 3e-80 Ubiquitin carboxyl-terminal hydrolase 15 OS Homo sapiens GN USP15 PE 1 SV 3
blastp_uniprot_sprot sp|F6Z5C0|UBP15_XENTR 95 561 + 467 Gaps:45 44.60 982 41.10 6e-80 Ubiquitin carboxyl-terminal hydrolase 15 OS Xenopus tropicalis GN usp15 PE 2 SV 2

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 43 537 495 PTHR24006:SF24 none none none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 43 537 495 PTHR24006 none none none
SUPERFAMILY 75 203 129 SSF143791 none none IPR006615
Phobius 6 16 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 22 589 568 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSiteProfiles 74 203 130 PS51283 none DUSP domain profile. IPR006615
Pfam 386 538 153 PF00443 none Ubiquitin carboxyl-terminal hydrolase IPR001394
ProSitePatterns 387 402 16 PS00972 none Ubiquitin specific protease (USP) domain signature 1. IPR018200
SUPERFAMILY 384 549 166 SSF54001 none none none
Pfam 97 203 107 PF06337 none DUSP domain IPR006615
SMART 93 206 114 SM00695 none Domain in ubiquitin-specific proteases. IPR006615
Gene3D 71 217 147 G3DSA:3.30.2230.10 none none IPR006615
ProSiteProfiles 386 589 204 PS50235 none Ubiquitin specific protease (USP) domain profile. IPR028889
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

1 Localization

Analysis Start End Length
SignalP_EUK 1 21 20

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2

0 Targeting