Protein : Qrob_P0668620.2 Q. robur
Protein Identifier  ? Qrob_P0668620.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 1.10.9.1 - Plastoquinol--plastocyanin reductase. Code Enzyme  EC:1.10.9.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 230  
Kegg Orthology  K02636
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0 Synonyms

8 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0042651 thylakoid membrane The pigmented membrane of any thylakoid.
GO:0051537 2 iron, 2 sulfur cluster binding Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
GO:0008121 ubiquinol-cytochrome-c reductase activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: CoQH2 + 2 ferricytochrome c = CoQ + 2 ferrocytochrome c + 2 H+.
GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors Catalysis of an oxidation-reduction (redox) reaction in which a diphenol or related substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0009496 plastoquinol--plastocyanin reductase activity Catalysis of the reaction: 2 H(+)[side 1] + 2 oxidized plastocyanin + plastoquinol-1 = 2 H(+)[side 2] + 2 reduced plastocyanin + plastoquinone. This reaction involves the concomitant transfer of 2 H+ ions across a membrane.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103941967 1 229 + 229 Gaps:2 100.00 227 77.97 3e-132 cytochrome b6-f complex iron-sulfur subunit chloroplastic-like
blastp_kegg lcl|tcc:TCM_007877 1 229 + 229 Gaps:3 100.00 228 80.26 1e-131 Photosynthetic electron transfer C
blastp_kegg lcl|gmx:100127419 1 229 + 229 Gaps:2 100.00 227 77.97 6e-131 PETC Rieske iron-sulphur protein precursor
blastp_kegg lcl|vvi:100258879 1 229 + 229 Gaps:3 100.00 228 78.07 8e-129 cytochrome b6-f complex iron-sulfur subunit chloroplastic-like
blastp_kegg lcl|mdm:103404760 1 229 + 229 Gaps:2 100.00 227 78.85 2e-128 cytochrome b6-f complex iron-sulfur subunit chloroplastic
blastp_kegg lcl|gmx:100799420 1 222 + 222 Gaps:2 83.97 262 79.09 8e-128 cytochrome b6-f complex iron-sulfur subunit chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_005G109400g 1 229 + 229 Gaps:2 100.00 227 78.41 3e-127 hypothetical protein
blastp_kegg lcl|pmum:103329498 1 229 + 229 Gaps:2 100.00 227 79.30 3e-127 cytochrome b6-f complex iron-sulfur subunit chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa011015mg 1 229 + 229 Gaps:2 100.00 227 79.30 4e-127 hypothetical protein
blastp_kegg lcl|cit:102606718 9 229 + 221 Gaps:3 96.07 229 79.09 2e-125 cytochrome b6-f complex iron-sulfur subunit chloroplastic-like
blastp_pdb 2ybb_E 155 211 + 57 Gaps:1 29.59 196 44.83 3e-09 mol:protein length:196 CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE MITOC
blastp_pdb 1rfs_A 90 229 + 140 Gaps:2 99.28 139 84.06 2e-78 mol:protein length:139 RIESKE PROTEIN
blastp_pdb 2d2c_Q 58 228 + 171 Gaps:2 94.41 179 60.95 4e-69 mol:protein length:179 Cytochrome b6-f complex iron-sulfur subunit
blastp_pdb 2d2c_D 58 228 + 171 Gaps:2 94.41 179 60.95 4e-69 mol:protein length:179 Cytochrome b6-f complex iron-sulfur subunit
blastp_pdb 1vf5_Q 58 228 + 171 Gaps:2 94.41 179 60.95 4e-69 mol:protein length:179 RIESKE IRON-SULFUR PROTEIN
blastp_pdb 1vf5_D 58 228 + 171 Gaps:2 94.41 179 60.95 4e-69 mol:protein length:179 RIESKE IRON-SULFUR PROTEIN
blastp_pdb 2e76_D 58 228 + 171 Gaps:2 94.41 179 60.36 1e-68 mol:protein length:179 Cytochrome b6-f complex iron-sulfur subunit
blastp_pdb 2e75_D 58 228 + 171 Gaps:2 94.41 179 60.36 1e-68 mol:protein length:179 Cytochrome b6-f complex iron-sulfur subunit
blastp_pdb 2e74_D 58 228 + 171 Gaps:2 94.41 179 60.36 1e-68 mol:protein length:179 Cytochrome b6-f complex iron-sulfur subunit
blastp_pdb 2zt9_D 58 229 + 172 Gaps:2 94.97 179 61.18 5e-68 mol:protein length:179 Cytochrome b6-f complex iron-sulfur subunit 1
blastp_uniprot_sprot sp|P26291|UCRIA_PEA 1 229 + 229 Gaps:1 100.00 230 77.39 3e-122 Cytochrome b6-f complex iron-sulfur subunit chloroplastic OS Pisum sativum GN petC PE 1 SV 1
blastp_uniprot_sprot sp|Q69S39|UCRIA_ORYSJ 1 229 + 229 Gaps:16 100.00 225 72.00 3e-110 Cytochrome b6-f complex iron-sulfur subunit chloroplastic OS Oryza sativa subsp. japonica GN petC PE 1 SV 1
blastp_uniprot_sprot sp|Q7X9A6|UCRIA_WHEAT 1 228 + 228 Gaps:11 99.55 222 69.68 3e-107 Cytochrome b6-f complex iron-sulfur subunit chloroplastic OS Triticum aestivum GN petC PE 2 SV 1
blastp_uniprot_sprot sp|O49078|UCRIA_FRIAG 11 229 + 219 Gaps:10 95.22 230 73.97 9e-106 Cytochrome b6-f complex iron-sulfur subunit chloroplastic OS Fritillaria agrestis GN petC PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZR03|UCRIA_ARATH 1 229 + 229 Gaps:6 100.00 229 75.98 2e-105 Cytochrome b6-f complex iron-sulfur subunit chloroplastic OS Arabidopsis thaliana GN petC PE 1 SV 1
blastp_uniprot_sprot sp|P08980|UCRIA_SPIOL 1 229 + 229 Gaps:6 99.57 230 73.80 5e-105 Cytochrome b6-f complex iron-sulfur subunit chloroplastic OS Spinacia oleracea GN petC PE 1 SV 2
blastp_uniprot_sprot sp|Q69GY7|UCRIA_SOLTU 1 229 + 229 Gaps:5 100.00 230 74.78 5e-104 Cytochrome b6-f complex iron-sulfur subunit chloroplastic OS Solanum tuberosum GN petC PE 2 SV 1
blastp_uniprot_sprot sp|Q02585|UCRIB_TOBAC 1 229 + 229 Gaps:7 100.00 228 76.75 2e-103 Cytochrome b6-f complex iron-sulfur subunit 2 chloroplastic OS Nicotiana tabacum GN petC2 PE 2 SV 1
blastp_uniprot_sprot sp|P30361|UCRIA_TOBAC 1 229 + 229 Gaps:7 100.00 228 76.32 1e-102 Cytochrome b6-f complex iron-sulfur subunit 1 chloroplastic OS Nicotiana tabacum GN petC1 PE 2 SV 2
blastp_uniprot_sprot sp|B0JXB7|UCRI_MICAN 51 229 + 179 Gaps:1 99.44 179 64.04 1e-79 Cytochrome b6-f complex iron-sulfur subunit OS Microcystis aeruginosa (strain NIES-843) GN petC PE 3 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 67 87 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 36 218 183 PTHR10134:SF5 none none none
ProSiteProfiles 114 210 97 PS51296 none Rieske [2Fe-2S] iron-sulfur domain profile. IPR017941
Phobius 88 229 142 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 66 66 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 184 196 13 PR00162 none Rieske 2Fe-2S subunit signature IPR005805
PRINTS 151 162 12 PR00162 none Rieske 2Fe-2S subunit signature IPR005805
PRINTS 172 184 13 PR00162 none Rieske 2Fe-2S subunit signature IPR005805
Pfam 136 196 61 PF00355 none Rieske [2Fe-2S] domain IPR017941
SUPERFAMILY 56 228 173 SSF50022 none none IPR017941
Gene3D 59 228 170 G3DSA:2.102.10.10 none none IPR017941
PANTHER 36 218 183 PTHR10134 none none IPR014349
Pfam 56 94 39 PF08802 "KEGG:00195+1.10.9.1","MetaCyc:PWY-101","MetaCyc:PWY-6785" Cytochrome B6-F complex Fe-S subunit IPR014909

1 Localization

Analysis Start End Length
TMHMM 67 89 22

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting