Protein : Qrob_P0610930.2 Q. robur

Protein Identifier  ? Qrob_P0610930.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=16) K15397 - 3-ketoacyl-CoA synthase [EC:2.3.1.199] Code Enzyme  EC:2.3.1.199
Gene Prediction Quality  validated Protein length 

Sequence

Length: 464  
Kegg Orthology  K15397

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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0006633 fatty acid biosynthetic process The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
GO:0008610 lipid biosynthetic process The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0009s03190g 1 460 + 460 Gaps:3 99.57 461 70.15 0.0 POPTRDRAFT_804585 beta-ketoacyl-CoA synthase family protein
blastp_kegg lcl|rcu:RCOM_1227380 1 463 + 463 Gaps:8 98.32 475 68.52 0.0 acyltransferase putative
blastp_kegg lcl|csv:101213216 1 463 + 463 Gaps:2 100.00 461 67.68 0.0 3-ketoacyl-CoA synthase 12-like
blastp_kegg lcl|cmo:103490572 1 463 + 463 Gaps:2 100.00 461 67.46 0.0 3-ketoacyl-CoA synthase 12
blastp_kegg lcl|fve:101309137 1 459 + 459 Gaps:4 98.71 465 69.93 0.0 3-ketoacyl-CoA synthase 12-like
blastp_kegg lcl|pmum:103322597 1 463 + 463 Gaps:5 99.14 466 70.35 0.0 3-ketoacyl-CoA synthase 12
blastp_kegg lcl|pper:PRUPE_ppa021836mg 1 463 + 463 Gaps:5 99.14 466 70.56 0.0 hypothetical protein
blastp_kegg lcl|pxb:103948938 1 459 + 459 Gaps:8 98.72 469 68.68 0.0 3-ketoacyl-CoA synthase 12-like
blastp_kegg lcl|mdm:103447764 1 459 + 459 Gaps:8 98.30 471 68.90 0.0 3-ketoacyl-CoA synthase 12-like
blastp_kegg lcl|pxb:103945678 1 459 + 459 Gaps:8 98.30 471 68.90 0.0 3-ketoacyl-CoA synthase 12-like
blastp_pdb 3awk_A 103 408 + 306 Gaps:46 66.67 402 24.63 6e-09 mol:protein length:402 Chalcone synthase-like polyketide synthase
blastp_pdb 3awj_B 103 408 + 306 Gaps:46 66.67 402 24.63 6e-09 mol:protein length:402 Chalcone synthase-like polyketide synthase
blastp_pdb 3awj_A 103 408 + 306 Gaps:46 66.67 402 24.63 6e-09 mol:protein length:402 Chalcone synthase-like polyketide synthase
blastp_pdb 1i8b_B 103 408 + 306 Gaps:44 68.89 389 25.00 2e-08 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_pdb 1i8b_A 103 408 + 306 Gaps:44 68.89 389 25.00 2e-08 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_pdb 1i89_B 103 408 + 306 Gaps:44 68.89 389 24.63 9e-08 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_pdb 1i89_A 103 408 + 306 Gaps:44 68.89 389 24.63 9e-08 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_pdb 1i88_B 103 408 + 306 Gaps:44 68.89 389 24.63 1e-07 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_pdb 1i88_A 103 408 + 306 Gaps:44 68.89 389 24.63 1e-07 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_pdb 1i86_A 103 408 + 306 Gaps:44 68.89 389 24.63 2e-07 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_uniprot_sprot sp|Q9SIB2|KCS12_ARATH 25 463 + 439 Gaps:10 94.33 476 64.81 0.0 3-ketoacyl-CoA synthase 12 OS Arabidopsis thaliana GN KCS12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LQP8|KCS3_ARATH 14 463 + 450 Gaps:12 96.65 478 62.55 0.0 3-ketoacyl-CoA synthase 3 OS Arabidopsis thaliana GN KCS3 PE 2 SV 3
blastp_uniprot_sprot sp|Q9LZ72|KCS21_ARATH 12 461 + 450 Gaps:12 96.12 464 52.47 1e-168 3-ketoacyl-CoA synthase 21 OS Arabidopsis thaliana GN KCS21 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MAM3|KCS1_ARATH 10 436 + 427 Gaps:16 80.11 528 43.97 1e-122 3-ketoacyl-CoA synthase 1 OS Arabidopsis thaliana GN KCS1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C6L5|KCS5_ARATH 6 436 + 431 Gaps:8 86.38 492 42.12 5e-118 3-ketoacyl-CoA synthase 5 OS Arabidopsis thaliana GN KCS5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZUZ0|KCS13_ARATH 5 436 + 432 Gaps:17 90.77 466 41.61 9e-117 3-ketoacyl-CoA synthase 13 OS Arabidopsis thaliana GN HIC PE 2 SV 1
blastp_uniprot_sprot sp|Q9XF43|KCS6_ARATH 14 436 + 423 Gaps:8 83.90 497 41.01 3e-115 3-ketoacyl-CoA synthase 6 OS Arabidopsis thaliana GN CUT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q38860|KCS18_ARATH 4 436 + 433 Gaps:42 85.57 506 42.96 8e-114 3-ketoacyl-CoA synthase 18 OS Arabidopsis thaliana GN FAE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SIX1|KCS9_ARATH 4 436 + 433 Gaps:13 82.42 512 41.23 3e-112 3-ketoacyl-CoA synthase 9 OS Arabidopsis thaliana GN KCS9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYZ0|KCS16_ARATH 9 436 + 428 Gaps:21 87.02 493 41.72 2e-111 3-ketoacyl-CoA synthase 16 OS Arabidopsis thaliana GN KCS16 PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 456 456 PTHR31561 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094";signature_desc=FAMILY NOT NAMED none IPR012392
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 19 231 213 SSF53901 none none IPR016039
Phobius 18 25 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 25 230 206 G3DSA:3.40.47.10 none none IPR016038
Phobius 26 463 438 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 326 416 91 SSF53901 none none IPR016039
SUPERFAMILY 243 293 51 SSF53901 none none IPR016039
Phobius 3 17 15 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PIRSF 1 450 450 PIRSF036417 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" none IPR012392
Pfam 334 415 82 PF08541 "KEGG:00061+2.3.1.180","MetaCyc:PWY-4381","UniPathway:UPA00094" 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IPR013747
Pfam 26 312 287 PF08392 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" FAE1/Type III polyketide synthase-like protein IPR013601
Gene3D 327 418 92 G3DSA:3.40.47.10 none none IPR016038
Gene3D 241 295 55 G3DSA:3.40.47.10 none none IPR016038
PANTHER 1 456 456 PTHR31561:SF4 none none none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran_2000_2002_QTL4_Delta.F Qrob_Chr09 9 s_1C1GRV_1289 v_12080_1202 2.56 0 13,73 lod 7.4808 0.051
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL4_d13Cf Qrob_Chr09 9 s_1C1GRV_1289 s_1BOL3D_361 2.56 0 12,57 lod 6.9263 0.028

0 Targeting