Protein : Qrob_P0563460.2 Q. robur
Protein Identifier  ? Qrob_P0563460.2 Organism . Name  Quercus robur
Score  6.2 Score Type  egn
Protein Description  (M=7) K01530 - phospholipid-translocating ATPase [EC:3.6.3.1] Code Enzyme  EC:3.6.3.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1193  
Kegg Orthology  K01530
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0004012 phospholipid-translocating ATPase activity Catalysis of the movement of phospholipids from one membrane bilayer leaflet to the other, driven by the hydrolysis of ATP.
GO:0015914 phospholipid transport The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0012s05450g 1 1186 + 1186 Gaps:4 99.50 1196 76.81 0.0 POPTRDRAFT_421641 hypothetical protein
blastp_kegg lcl|cit:102622947 1 1185 + 1185 Gaps:7 99.41 1189 77.07 0.0 putative phospholipid-transporting ATPase 9-like
blastp_kegg lcl|pper:PRUPE_ppa000418mg 1 1189 + 1189 Gaps:7 99.83 1198 75.84 0.0 hypothetical protein
blastp_kegg lcl|vvi:100247431 1 1186 + 1186 Gaps:4 99.83 1192 76.47 0.0 putative phospholipid-transporting ATPase 9-like
blastp_kegg lcl|mdm:103437960 2 1191 + 1190 Gaps:7 99.83 1193 75.82 0.0 putative phospholipid-transporting ATPase 9
blastp_kegg lcl|mdm:103455466 15 1191 + 1177 Gaps:5 98.66 1192 75.68 0.0 putative phospholipid-transporting ATPase 9
blastp_kegg lcl|pxb:103930036 15 1191 + 1177 Gaps:5 98.66 1192 76.02 0.0 putative phospholipid-transporting ATPase 9
blastp_kegg lcl|pxb:103938323 2 1191 + 1190 Gaps:6 99.83 1194 75.00 0.0 putative phospholipid-transporting ATPase 9
blastp_kegg lcl|rcu:RCOM_1618700 1 1183 + 1183 Gaps:7 99.75 1187 75.25 0.0 Phospholipid-transporting ATPase putative (EC:3.6.3.1)
blastp_kegg lcl|gmx:100797039 1 1180 + 1180 Gaps:6 99.07 1189 74.62 0.0 putative phospholipid-transporting ATPase 9-like
blastp_pdb 3a3y_A 577 882 + 306 Gaps:63 26.17 1028 29.37 7e-10 mol:protein length:1028 Na K-ATPase alpha subunit
blastp_pdb 2zxe_A 577 882 + 306 Gaps:63 26.17 1028 29.37 7e-10 mol:protein length:1028 Na K-ATPase alpha subunit
blastp_pdb 3kdp_C 577 880 + 304 Gaps:53 26.75 998 28.46 1e-06 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3kdp_A 577 880 + 304 Gaps:53 26.75 998 28.46 1e-06 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_C 577 880 + 304 Gaps:53 26.75 998 28.46 1e-06 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_A 577 880 + 304 Gaps:53 26.75 998 28.46 1e-06 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n2f_C 577 880 + 304 Gaps:53 26.92 992 28.46 1e-06 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n2f_A 577 880 + 304 Gaps:53 26.92 992 28.46 1e-06 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_C 577 880 + 304 Gaps:53 26.92 992 28.46 1e-06 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_A 577 880 + 304 Gaps:53 26.92 992 28.46 1e-06 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_uniprot_sprot sp|Q9SX33|ALA9_ARATH 1 1182 + 1182 Gaps:13 99.25 1200 67.25 0.0 Putative phospholipid-transporting ATPase 9 OS Arabidopsis thaliana GN ALA9 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LI83|ALA10_ARATH 9 1189 + 1181 Gaps:8 98.42 1202 67.29 0.0 Phospholipid-transporting ATPase 10 OS Arabidopsis thaliana GN ALA10 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SAF5|ALA11_ARATH 6 1189 + 1184 Gaps:9 98.84 1203 66.61 0.0 Putative phospholipid-transporting ATPase 11 OS Arabidopsis thaliana GN ALA11 PE 2 SV 1
blastp_uniprot_sprot sp|P57792|ALA12_ARATH 6 1171 + 1166 Gaps:3 98.56 1184 64.95 0.0 Putative phospholipid-transporting ATPase 12 OS Arabidopsis thaliana GN ALA12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LK90|ALA8_ARATH 1 1143 + 1143 Gaps:12 96.47 1189 62.95 0.0 Putative phospholipid-transporting ATPase 8 OS Arabidopsis thaliana GN ALA8 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LVK9|ALA7_ARATH 8 1190 + 1183 Gaps:56 97.26 1243 54.92 0.0 Putative phospholipid-transporting ATPase 7 OS Arabidopsis thaliana GN ALA7 PE 3 SV 3
blastp_uniprot_sprot sp|Q9LNQ4|ALA4_ARATH 3 1185 + 1183 Gaps:32 97.78 1216 54.92 0.0 Putative phospholipid-transporting ATPase 4 OS Arabidopsis thaliana GN ALA4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SGG3|ALA5_ARATH 3 1185 + 1183 Gaps:42 97.80 1228 54.37 0.0 Putative phospholipid-transporting ATPase 5 OS Arabidopsis thaliana GN ALA5 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SLK6|ALA6_ARATH 8 1190 + 1183 Gaps:52 97.66 1240 53.92 0.0 Phospholipid-transporting ATPase 6 OS Arabidopsis thaliana GN ALA6 PE 1 SV 2
blastp_uniprot_sprot sp|Q9XIE6|ALA3_ARATH 18 1168 + 1151 Gaps:36 93.57 1213 46.96 0.0 Phospholipid-transporting ATPase 3 OS Arabidopsis thaliana GN ALA3 PE 1 SV 2

47 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 379 921 543 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 99 103 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 424 430 7 PS00154 none E1-E2 ATPases phosphorylation site. IPR018303
Phobius 1020 1038 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1059 1069 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 421 870 450 PF12710 none haloacid dehalogenase-like hydrolase none
SUPERFAMILY 833 903 71 SSF56784 none none IPR023214
SUPERFAMILY 646 752 107 SSF56784 none none IPR023214
SUPERFAMILY 410 434 25 SSF56784 none none IPR023214
Phobius 1129 1192 64 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 322 354 33 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 247 283 37 G3DSA:2.70.150.10 none none IPR008250
Gene3D 81 209 129 G3DSA:2.70.150.10 none none IPR008250
TIGRFAM 53 1144 1092 TIGR01652 none ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase IPR006539
PANTHER 6 1183 1178 PTHR24092:SF41 none none none
SUPERFAMILY 242 282 41 SSF81653 none none none
SUPERFAMILY 136 207 72 SSF81653 none none none
Phobius 104 121 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1089 1107 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 993 1019 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1108 1128 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 973 992 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 703 759 57 G3DSA:3.40.50.1000 none none IPR023214
Gene3D 830 916 87 G3DSA:3.40.50.1000 none none IPR023214
Gene3D 505 702 198 G3DSA:3.40.1110.10 none none IPR023299
Gene3D 412 458 47 G3DSA:3.40.1110.10 none none IPR023299
PRINTS 422 436 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 859 878 20 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
Phobius 355 378 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1070 1088 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

8 Localization

Analysis Start End Length
TMHMM 354 376 22
TMHMM 1070 1089 19
TMHMM 919 941 22
TMHMM 1109 1128 19
TMHMM 951 973 22
TMHMM 994 1016 22
TMHMM 300 322 22
TMHMM 1036 1058 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting