Protein : Qrob_P0563400.2 Q. robur
Protein Identifier  ? Qrob_P0563400.2 Organism . Name  Quercus robur
Score  68.2 Score Type  egn
Protein Description  (M=7) K01530 - phospholipid-translocating ATPase [EC:3.6.3.1] Code Enzyme  EC:3.6.3.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1196  
Kegg Orthology  K01530
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0004012 phospholipid-translocating ATPase activity Catalysis of the movement of phospholipids from one membrane bilayer leaflet to the other, driven by the hydrolysis of ATP.
GO:0015914 phospholipid transport The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Phospholipids are any lipids containing phosphoric acid as a mono- or diester.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0012s05450g 1 1191 + 1191 none 99.58 1196 83.96 0.0 POPTRDRAFT_421641 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa000418mg 1 1194 + 1194 Gaps:3 99.92 1198 83.04 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1618700 1 1187 + 1187 Gaps:3 99.75 1187 83.19 0.0 Phospholipid-transporting ATPase putative (EC:3.6.3.1)
blastp_kegg lcl|cit:102622947 1 1193 + 1193 Gaps:7 99.75 1189 83.81 0.0 putative phospholipid-transporting ATPase 9-like
blastp_kegg lcl|mdm:103437960 2 1195 + 1194 Gaps:3 99.83 1193 82.37 0.0 putative phospholipid-transporting ATPase 9
blastp_kegg lcl|vvi:100247431 1 1191 + 1191 none 99.92 1192 82.70 0.0 putative phospholipid-transporting ATPase 9-like
blastp_kegg lcl|mdm:103455466 14 1195 + 1182 Gaps:5 98.74 1192 82.41 0.0 putative phospholipid-transporting ATPase 9
blastp_kegg lcl|tcc:TCM_014475 1 1195 + 1195 Gaps:41 100.00 1154 85.62 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein isoform 1
blastp_kegg lcl|pxb:103930036 14 1195 + 1182 Gaps:5 98.74 1192 82.92 0.0 putative phospholipid-transporting ATPase 9
blastp_kegg lcl|pxb:103938323 2 1195 + 1194 Gaps:2 99.83 1194 82.13 0.0 putative phospholipid-transporting ATPase 9
blastp_pdb 3a3y_A 415 884 + 470 Gaps:126 36.38 1028 29.95 3e-11 mol:protein length:1028 Na K-ATPase alpha subunit
blastp_pdb 2zxe_A 415 884 + 470 Gaps:126 36.38 1028 29.95 3e-11 mol:protein length:1028 Na K-ATPase alpha subunit
blastp_pdb 3n2f_C 415 884 + 470 Gaps:124 37.70 992 27.81 8e-08 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n2f_A 415 884 + 470 Gaps:124 37.70 992 27.81 8e-08 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_C 415 884 + 470 Gaps:124 37.70 992 27.81 8e-08 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_A 415 884 + 470 Gaps:124 37.70 992 27.81 8e-08 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3kdp_C 415 884 + 470 Gaps:124 37.47 998 27.81 9e-08 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3kdp_A 415 884 + 470 Gaps:124 37.47 998 27.81 9e-08 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_C 415 884 + 470 Gaps:124 37.47 998 27.81 9e-08 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_A 415 884 + 470 Gaps:124 37.47 998 27.81 9e-08 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_uniprot_sprot sp|Q9SX33|ALA9_ARATH 1 1186 + 1186 Gaps:11 99.25 1200 71.87 0.0 Putative phospholipid-transporting ATPase 9 OS Arabidopsis thaliana GN ALA9 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LI83|ALA10_ARATH 10 1187 + 1178 Gaps:6 97.84 1202 70.92 0.0 Phospholipid-transporting ATPase 10 OS Arabidopsis thaliana GN ALA10 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SAF5|ALA11_ARATH 1 1187 + 1187 Gaps:9 98.75 1203 70.12 0.0 Putative phospholipid-transporting ATPase 11 OS Arabidopsis thaliana GN ALA11 PE 2 SV 1
blastp_uniprot_sprot sp|P57792|ALA12_ARATH 1 1175 + 1175 Gaps:4 99.07 1184 69.39 0.0 Putative phospholipid-transporting ATPase 12 OS Arabidopsis thaliana GN ALA12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LK90|ALA8_ARATH 1 1147 + 1147 Gaps:12 96.47 1189 66.70 0.0 Putative phospholipid-transporting ATPase 8 OS Arabidopsis thaliana GN ALA8 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LVK9|ALA7_ARATH 8 1191 + 1184 Gaps:50 96.70 1243 57.74 0.0 Putative phospholipid-transporting ATPase 7 OS Arabidopsis thaliana GN ALA7 PE 3 SV 3
blastp_uniprot_sprot sp|Q9LNQ4|ALA4_ARATH 1 1191 + 1191 Gaps:29 98.19 1216 57.45 0.0 Putative phospholipid-transporting ATPase 4 OS Arabidopsis thaliana GN ALA4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SGG3|ALA5_ARATH 1 1191 + 1191 Gaps:41 98.21 1228 56.88 0.0 Putative phospholipid-transporting ATPase 5 OS Arabidopsis thaliana GN ALA5 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SLK6|ALA6_ARATH 8 1191 + 1184 Gaps:54 97.10 1240 56.73 0.0 Phospholipid-transporting ATPase 6 OS Arabidopsis thaliana GN ALA6 PE 1 SV 2
blastp_uniprot_sprot sp|Q9XIE6|ALA3_ARATH 38 1151 + 1114 Gaps:32 90.35 1213 48.63 0.0 Phospholipid-transporting ATPase 3 OS Arabidopsis thaliana GN ALA3 PE 1 SV 2

49 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 707 763 57 G3DSA:3.40.50.1000 none none IPR023214
Gene3D 834 920 87 G3DSA:3.40.50.1000 none none IPR023214
Phobius 1005 1027 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 379 925 547 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1073 1092 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 498 701 204 SSF81660 none none IPR023299
SUPERFAMILY 431 466 36 SSF81660 none none IPR023299
Coils 622 643 22 Coil none none none
Gene3D 414 460 47 G3DSA:3.40.1110.10 none none IPR023299
Gene3D 509 706 198 G3DSA:3.40.1110.10 none none IPR023299
Gene3D 82 211 130 G3DSA:2.70.150.10 none none IPR008250
Gene3D 249 285 37 G3DSA:2.70.150.10 none none IPR008250
Phobius 324 356 33 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 137 209 73 SSF81653 none none none
SUPERFAMILY 244 284 41 SSF81653 none none none
Pfam 114 388 275 PF00122 none E1-E2 ATPase IPR008250
PANTHER 5 1187 1183 PTHR24092 none none IPR006539
Phobius 1 82 82 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1067 1072 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 944 954 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 102 106 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 357 378 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1028 1046 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 426 432 7 PS00154 none E1-E2 ATPases phosphorylation site. IPR018303
Phobius 124 301 178 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
TIGRFAM 834 946 113 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
Phobius 1133 1195 63 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
TIGRFAM 55 1148 1094 TIGR01652 none ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase IPR006539
Phobius 976 1004 29 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1093 1111 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

8 Localization

Analysis Start End Length
TMHMM 356 378 22
TMHMM 302 324 22
TMHMM 956 975 19
TMHMM 924 946 22
TMHMM 1111 1133 22
TMHMM 1002 1024 22
TMHMM 1069 1091 22
TMHMM 1039 1056 17

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting