Protein : Qrob_P0470620.2 Q. robur
Protein Identifier  ? Qrob_P0470620.2 Organism . Name  Quercus robur
Score  85.1 Score Type  egn
Protein Description  (M=2) K10746 - exonuclease 1 [EC:3.1.-.-] Code Enzyme  EC:3.1.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 740  
Kegg Orthology  K10746
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0006281 DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO:0004518 nuclease activity Catalysis of the hydrolysis of ester linkages within nucleic acids.
GO:0016788 hydrolase activity, acting on ester bonds Catalysis of the hydrolysis of any ester bond.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103325046 1 738 + 738 Gaps:75 99.13 693 69.87 0.0 exonuclease 1
blastp_kegg lcl|cit:102615179 1 738 + 738 Gaps:68 99.86 691 68.26 0.0 exonuclease 1-like
blastp_kegg lcl|tcc:TCM_029587 1 726 + 726 Gaps:72 99.70 674 68.60 0.0 5'-3' exonuclease family protein isoform 1
blastp_kegg lcl|gmx:100798062 1 732 + 732 Gaps:60 99.06 743 62.91 0.0 exonuclease 1-like
blastp_kegg lcl|mdm:103422350 1 738 + 738 Gaps:80 99.28 691 67.06 0.0 exonuclease 1-like
blastp_kegg lcl|pxb:103951219 1 738 + 738 Gaps:81 99.13 691 67.30 0.0 exonuclease 1
blastp_kegg lcl|vvi:100245156 1 738 + 738 Gaps:94 99.09 658 68.25 0.0 exonuclease 1-like
blastp_kegg lcl|cam:101511143 1 733 + 733 Gaps:69 95.98 721 64.31 0.0 exonuclease 1-like
blastp_kegg lcl|cic:CICLE_v10014561mg 1 712 + 712 Gaps:84 100.00 646 68.42 0.0 hypothetical protein
blastp_kegg lcl|csv:101214177 1 739 + 739 Gaps:82 99.71 685 63.98 0.0 exonuclease 1-like
blastp_pdb 3qeb_Z 1 311 + 311 Gaps:7 89.77 352 41.77 2e-73 mol:protein length:352 Exonuclease 1
blastp_pdb 3qea_Z 1 311 + 311 Gaps:7 89.77 352 41.77 2e-73 mol:protein length:352 Exonuclease 1
blastp_pdb 3qe9_Z 1 311 + 311 Gaps:7 89.77 352 41.46 2e-72 mol:protein length:352 Exonuclease 1
blastp_pdb 3qe9_Y 1 311 + 311 Gaps:7 89.77 352 41.46 2e-72 mol:protein length:352 Exonuclease 1
blastp_pdb 1ul1_Z 2 286 + 285 Gaps:13 76.52 379 26.21 5e-19 mol:protein length:379 Flap endonuclease-1
blastp_pdb 1ul1_Y 2 286 + 285 Gaps:13 76.52 379 26.21 5e-19 mol:protein length:379 Flap endonuclease-1
blastp_pdb 1ul1_X 2 286 + 285 Gaps:13 76.52 379 26.21 5e-19 mol:protein length:379 Flap endonuclease-1
blastp_pdb 3q8l_A 2 286 + 285 Gaps:13 85.04 341 26.21 8e-19 mol:protein length:341 Flap endonuclease 1
blastp_pdb 3q8k_A 2 286 + 285 Gaps:13 85.04 341 26.21 8e-19 mol:protein length:341 Flap endonuclease 1
blastp_pdb 3q8m_B 2 286 + 285 Gaps:13 85.04 341 25.86 8e-18 mol:protein length:341 Flap endonuclease 1
blastp_uniprot_sprot sp|Q8L6Z7|EXO1_ARATH 1 738 + 738 Gaps:80 99.86 735 56.40 0.0 Exonuclease 1 OS Arabidopsis thaliana GN EXO1 PE 2 SV 2
blastp_uniprot_sprot sp|Q60GC1|EXO1_ORYSJ 1 737 + 737 Gaps:66 86.24 836 51.46 0.0 Exonuclease 1 OS Oryza sativa subsp. japonica GN EXO1 PE 2 SV 1
blastp_uniprot_sprot sp|Q54ED2|EXO1_DICDI 1 294 + 294 Gaps:2 28.30 1046 46.62 6e-81 Exonuclease 1 OS Dictyostelium discoideum GN exo1 PE 3 SV 1
blastp_uniprot_sprot sp|Q803U7|EXO1_DANRE 1 301 + 301 Gaps:6 37.84 806 47.21 3e-77 Exonuclease 1 OS Danio rerio GN exo1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9W6K2|EXO1_XENLA 1 364 + 364 Gaps:17 48.91 734 40.67 2e-76 Exonuclease 1 OS Xenopus laevis GN exo1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9UQ84|EXO1_HUMAN 1 352 + 352 Gaps:18 42.79 846 40.33 3e-71 Exonuclease 1 OS Homo sapiens GN EXO1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9QZ11|EXO1_MOUSE 1 311 + 311 Gaps:7 37.75 837 42.09 3e-69 Exonuclease 1 OS Mus musculus GN Exo1 PE 2 SV 2
blastp_uniprot_sprot sp|P53695|EXO1_SCHPO 1 342 + 342 Gaps:6 59.54 571 35.88 2e-66 Exodeoxyribonuclease 1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN exo1 PE 1 SV 1
blastp_uniprot_sprot sp|P39875|EXO1_YEAST 1 297 + 297 Gaps:2 42.59 702 38.80 1e-64 Exodeoxyribonuclease 1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN EXO1 PE 1 SV 2
blastp_uniprot_sprot sp|Q24558|EXO1_DROME 1 332 + 332 Gaps:6 46.17 732 37.87 2e-62 Exonuclease 1 OS Drosophila melanogaster GN tos PE 1 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 213 246 34 SM00279 none Helix-hairpin-helix class 2 (Pol1 family) motifs IPR008918
Pfam 139 226 88 PF00867 none XPG I-region IPR006086
SMART 138 208 71 SM00484 none Xeroderma pigmentosum G I-region IPR006086
PANTHER 2 408 407 PTHR11081:SF8 none none none
Pfam 1 98 98 PF00752 none XPG N-terminal domain IPR006085
ProSitePatterns 71 85 15 PS00841 none XPG protein signature 1. IPR019974
Gene3D 1 195 195 G3DSA:3.40.50.1010 none none IPR029060
PRINTS 24 38 15 PR00853 none Xeroderma pigmentosum group G/yeast RAD superfamily signature IPR006084
PRINTS 137 154 18 PR00853 none Xeroderma pigmentosum group G/yeast RAD superfamily signature IPR006084
PRINTS 216 231 16 PR00853 none Xeroderma pigmentosum group G/yeast RAD superfamily signature IPR006084
PRINTS 73 92 20 PR00853 none Xeroderma pigmentosum group G/yeast RAD superfamily signature IPR006084
PRINTS 158 178 21 PR00853 none Xeroderma pigmentosum group G/yeast RAD superfamily signature IPR006084
SUPERFAMILY 211 336 126 SSF47807 none none IPR020045
SUPERFAMILY 2 226 225 SSF88723 none none IPR029060
PANTHER 2 408 407 PTHR11081 none none IPR006084
Gene3D 212 257 46 G3DSA:1.10.150.20 none none none
SMART 1 99 99 SM00485 none Xeroderma pigmentosum G N-region IPR006085

0 Localization

0 Qtllist

0 Targeting