Protein : Qrob_P0398530.2 Q. robur
Protein Identifier  ? Qrob_P0398530.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 4.1.1.8 - Oxalyl-CoA decarboxylase. Code Enzyme  EC:4.1.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 572  
Kegg Orthology  K12261
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030976 thiamine pyrophosphate binding Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100778257 8 571 + 564 Gaps:8 99.65 566 81.21 0.0 2-hydroxyacyl-CoA lyase-like
blastp_kegg lcl|gmx:100781584 8 571 + 564 Gaps:8 99.65 566 80.85 0.0 2-hydroxyacyl-CoA lyase-like
blastp_kegg lcl|mdm:103405762 1 571 + 571 Gaps:7 100.00 570 81.23 0.0 2-hydroxyacyl-CoA lyase
blastp_kegg lcl|pper:PRUPE_ppa003377mg 6 571 + 566 Gaps:12 97.41 579 82.27 0.0 hypothetical protein
blastp_kegg lcl|pmum:103328654 6 571 + 566 Gaps:6 97.41 579 81.91 0.0 2-hydroxyacyl-CoA lyase
blastp_kegg lcl|pvu:PHAVU_008G243200g 8 571 + 564 Gaps:9 99.64 563 81.28 0.0 hypothetical protein
blastp_kegg lcl|mdm:103421889 1 571 + 571 Gaps:9 100.00 572 80.07 0.0 2-hydroxyacyl-CoA lyase-like
blastp_kegg lcl|pxb:103936009 1 571 + 571 Gaps:7 100.00 570 80.70 0.0 2-hydroxyacyl-CoA lyase-like
blastp_kegg lcl|vvi:100232933 3 571 + 569 Gaps:5 98.43 575 79.86 0.0 OXC oxalyl-CoA decarboxylase-like
blastp_kegg lcl|fve:101306541 1 571 + 571 Gaps:5 100.00 568 80.63 0.0 2-hydroxyacyl-CoA lyase-like
blastp_pdb 2jib_B 6 571 + 566 Gaps:35 97.36 568 43.04 4e-147 mol:protein length:568 OXALYL-COA DECARBOXYLASE
blastp_pdb 2jib_A 6 571 + 566 Gaps:35 97.36 568 43.04 4e-147 mol:protein length:568 OXALYL-COA DECARBOXYLASE
blastp_pdb 2ji9_B 6 571 + 566 Gaps:35 97.36 568 43.04 4e-147 mol:protein length:568 OXALYL-COA DECARBOXYLASE
blastp_pdb 2ji9_A 6 571 + 566 Gaps:35 97.36 568 43.04 4e-147 mol:protein length:568 OXALYL-COA DECARBOXYLASE
blastp_pdb 2ji8_B 6 571 + 566 Gaps:35 97.36 568 43.04 4e-147 mol:protein length:568 OXALYL-COA DECARBOXYLASE
blastp_pdb 2ji8_A 6 571 + 566 Gaps:35 97.36 568 43.04 4e-147 mol:protein length:568 OXALYL-COA DECARBOXYLASE
blastp_pdb 2ji7_B 6 571 + 566 Gaps:35 97.36 568 43.04 4e-147 mol:protein length:568 OXALYL-COA DECARBOXYLASE
blastp_pdb 2ji7_A 6 571 + 566 Gaps:35 97.36 568 43.04 4e-147 mol:protein length:568 OXALYL-COA DECARBOXYLASE
blastp_pdb 2ji6_B 6 571 + 566 Gaps:35 97.36 568 43.04 4e-147 mol:protein length:568 OXALYL-COA DECARBOXYLASE
blastp_pdb 2ji6_A 6 571 + 566 Gaps:35 97.36 568 43.04 4e-147 mol:protein length:568 OXALYL-COA DECARBOXYLASE
blastp_uniprot_sprot sp|Q9LF46|HACL_ARATH 1 571 + 571 Gaps:9 100.00 572 77.10 0.0 2-hydroxyacyl-CoA lyase OS Arabidopsis thaliana GN HACL PE 2 SV 1
blastp_uniprot_sprot sp|Q0JMH0|HACL_ORYSJ 2 571 + 570 Gaps:9 98.96 577 73.73 0.0 2-hydroxyacyl-CoA lyase OS Oryza sativa subsp. japonica GN Os01g0505400 PE 3 SV 3
blastp_uniprot_sprot sp|Q8CHM7|HACL1_RAT 3 558 + 556 Gaps:21 95.18 581 44.67 2e-156 2-hydroxyacyl-CoA lyase 1 OS Rattus norvegicus GN Hacl1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9UJ83|HACL1_HUMAN 3 560 + 558 Gaps:33 96.02 578 43.96 7e-155 2-hydroxyacyl-CoA lyase 1 OS Homo sapiens GN HACL1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9QXE0|HACL1_MOUSE 3 558 + 556 Gaps:23 95.18 581 43.22 7e-152 2-hydroxyacyl-CoA lyase 1 OS Mus musculus GN Hacl1 PE 2 SV 2
blastp_uniprot_sprot sp|P40149|OXC_OXAFO 6 571 + 566 Gaps:35 97.36 568 43.04 1e-146 Oxalyl-CoA decarboxylase OS Oxalobacter formigenes GN oxc PE 1 SV 1
blastp_uniprot_sprot sp|P0AFI0|OXC_ECOLI 1 571 + 571 Gaps:22 98.76 564 43.99 4e-143 Probable oxalyl-CoA decarboxylase OS Escherichia coli (strain K12) GN oxc PE 1 SV 1
blastp_uniprot_sprot sp|P0AFI1|OXC_ECO57 1 571 + 571 Gaps:22 98.76 564 43.99 4e-143 Probable oxalyl-CoA decarboxylase OS Escherichia coli O157:H7 GN oxc PE 3 SV 1
blastp_uniprot_sprot sp|Q54DA9|HACL1_DICDI 8 558 + 551 Gaps:28 98.45 580 39.40 9e-130 Probable 2-hydroxyacyl-CoA lyase 1 OS Dictyostelium discoideum GN hacl1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9Y7M1|YGK4_SCHPO 13 563 + 551 Gaps:21 96.13 568 41.03 2e-117 Putative 2-hydroxyacyl-CoA lyase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC725.04 PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 3 571 569 PTHR18968:SF6 none none none
SUPERFAMILY 13 176 164 SSF52518 none none IPR029061
Gene3D 194 403 210 G3DSA:3.40.50.1220 none none IPR029035
Gene3D 5 178 174 G3DSA:3.40.50.970 none none IPR029061
Pfam 13 175 163 PF02776 none Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IPR012001
SUPERFAMILY 387 561 175 SSF52518 none none IPR029061
ProSitePatterns 439 458 20 PS00187 none Thiamine pyrophosphate enzymes signature. IPR000399
SUPERFAMILY 196 359 164 SSF52467 none none IPR029035
Pfam 403 554 152 PF02775 none Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IPR011766
PANTHER 3 571 569 PTHR18968 none none none
Gene3D 404 562 159 G3DSA:3.40.50.970 none none IPR029061
Pfam 201 331 131 PF00205 none Thiamine pyrophosphate enzyme, central domain IPR012000

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting