9 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0003677 | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
GO:0003824 | catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
GO:0005634 | nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. |
GO:0006289 | nucleotide-excision repair | A DNA repair process in which a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts). |
GO:0006281 | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. |
GO:0004518 | nuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids. |
GO:0016788 | hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
GO:0004519 | endonuclease activity | Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks. |
GO:0003697 | single-stranded DNA binding | Interacting selectively and non-covalently with single-stranded DNA. |
43 Blast
31 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
ProSitePatterns | 70 | 84 | 15 | PS00841 | none | XPG protein signature 1. | IPR019974 |
SMART | 1 | 98 | 98 | SM00485 | none | Xeroderma pigmentosum G N-region | IPR006085 |
SUPERFAMILY | 1261 | 1347 | 87 | SSF47807 | none | none | IPR020045 |
SUPERFAMILY | 1106 | 1153 | 48 | SSF47807 | none | none | IPR020045 |
SMART | 1108 | 1141 | 34 | SM00279 | none | Helix-hairpin-helix class 2 (Pol1 family) motifs | IPR008918 |
SUPERFAMILY | 1004 | 1121 | 118 | SSF88723 | none | none | IPR029060 |
SUPERFAMILY | 2 | 103 | 102 | SSF88723 | none | none | IPR029060 |
PRINTS | 54 | 77 | 24 | PR00066 | none | Xeroderma pigmentosum group G protein signature | IPR001044 |
PRINTS | 96 | 118 | 23 | PR00066 | none | Xeroderma pigmentosum group G protein signature | IPR001044 |
PRINTS | 222 | 247 | 26 | PR00066 | none | Xeroderma pigmentosum group G protein signature | IPR001044 |
PRINTS | 2 | 19 | 18 | PR00066 | none | Xeroderma pigmentosum group G protein signature | IPR001044 |
Pfam | 1 | 97 | 97 | PF00752 | none | XPG N-terminal domain | IPR006085 |
Gene3D | 1017 | 1105 | 89 | G3DSA:3.40.50.1010 | none | none | IPR029060 |
Gene3D | 1 | 116 | 116 | G3DSA:3.40.50.1010 | none | none | IPR029060 |
Phobius | 1232 | 1253 | 22 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
Coils | 116 | 137 | 22 | Coil | none | none | none |
Gene3D | 1106 | 1155 | 50 | G3DSA:1.10.150.20 | none | none | none |
ProSitePatterns | 1040 | 1054 | 15 | PS00842 | none | XPG protein signature 2. | IPR019974 |
PANTHER | 990 | 1162 | 173 | PTHR11081:SF1 | none | none | IPR001044 |
PRINTS | 24 | 38 | 15 | PR00853 | none | Xeroderma pigmentosum group G/yeast RAD superfamily signature | IPR006084 |
PRINTS | 72 | 91 | 20 | PR00853 | none | Xeroderma pigmentosum group G/yeast RAD superfamily signature | IPR006084 |
SMART | 1037 | 1106 | 70 | SM00484 | none | Xeroderma pigmentosum G I-region | IPR006086 |
PANTHER | 990 | 1162 | 173 | PTHR11081 | none | none | IPR006084 |
PANTHER | 1264 | 1431 | 168 | PTHR11081 | none | none | IPR006084 |
PANTHER | 2 | 106 | 105 | PTHR11081 | none | none | IPR006084 |
Phobius | 1 | 1231 | 1231 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
Phobius | 1254 | 1538 | 285 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
PANTHER | 1264 | 1431 | 168 | PTHR11081:SF1 | none | none | IPR001044 |
PANTHER | 2 | 106 | 105 | PTHR11081:SF1 | none | none | IPR001044 |
Pfam | 1039 | 1121 | 83 | PF00867 | none | XPG I-region | IPR006086 |