Protein : Qrob_P0279490.2 Q. robur
Protein Identifier  ? Qrob_P0279490.2 Organism . Name  Quercus robur
Score  82.2 Score Type  egn
Protein Description  (M=2) 1.13.11.58 - Linoleate 9S-lipoxygenase. Code Enzyme  EC:1.13.11.58
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1106  
Kegg Orthology  K15718
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and two oxygen atoms is incorporated into a donor.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102621914 1 1105 + 1105 Gaps:28 100.00 882 82.88 0.0 linoleate 9S-lipoxygenase 5 chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0677750 14 1105 + 1092 Gaps:21 100.00 868 83.06 0.0 lipoxygenase putative (EC:1.13.11.12)
blastp_kegg lcl|mdm:103453113 14 1105 + 1092 Gaps:30 100.00 879 79.18 0.0 LOX3a probable linoleate 9S-lipoxygenase 5 (EC:1.13.11.12)
blastp_kegg lcl|pop:POPTR_0010s09970g 1 1105 + 1105 Gaps:20 100.00 880 80.91 0.0 POPTRDRAFT_821983 lipoxygenase family protein
blastp_kegg lcl|pop:POPTR_0008s15090g 1 1105 + 1105 Gaps:20 100.00 880 81.02 0.0 POPTRDRAFT_832809 lipoxygenase family protein
blastp_kegg lcl|pxb:103935971 5 1105 + 1101 Gaps:30 99.33 894 78.60 0.0 probable linoleate 9S-lipoxygenase 5
blastp_kegg lcl|fve:101301961 1 1105 + 1105 Gaps:24 100.00 884 79.64 0.0 linoleate 9S-lipoxygenase 5 chloroplastic-like
blastp_kegg lcl|mdm:103403905 33 1105 + 1073 Gaps:24 99.29 850 77.25 0.0 linoleate 9S-lipoxygenase 5 chloroplastic-like
blastp_kegg lcl|pxb:103956622 9 1105 + 1097 Gaps:30 100.00 884 77.60 0.0 probable linoleate 9S-lipoxygenase 5
blastp_kegg lcl|sot:102593728 3 1105 + 1103 Gaps:26 99.55 887 75.20 0.0 probable linoleate 9S-lipoxygenase 5-like
blastp_pdb 1rrl_B 36 1105 + 1070 Gaps:65 98.83 857 62.93 0.0 mol:protein length:857 Seed lipoxygenase-3
blastp_pdb 1rrl_A 36 1105 + 1070 Gaps:65 98.83 857 62.93 0.0 mol:protein length:857 Seed lipoxygenase-3
blastp_pdb 1rrh_A 36 1105 + 1070 Gaps:65 98.83 857 62.93 0.0 mol:protein length:857 Seed lipoxygenase-3
blastp_pdb 1rov_A 36 1105 + 1070 Gaps:65 98.83 857 62.93 0.0 mol:protein length:857 Seed lipoxygenase-3
blastp_pdb 1no3_A 36 1105 + 1070 Gaps:65 98.83 857 62.93 0.0 mol:protein length:857 Lipoxygenase-3
blastp_pdb 1n8q_A 36 1105 + 1070 Gaps:65 98.83 857 62.93 0.0 mol:protein length:857 lipoxygenase-3
blastp_pdb 1lnh_A 36 1105 + 1070 Gaps:65 98.83 857 62.93 0.0 mol:protein length:857 LIPOXYGENASE-3
blastp_pdb 1jnq_A 36 1105 + 1070 Gaps:65 98.83 857 62.93 0.0 mol:protein length:857 lipoxygenase-3
blastp_pdb 1ik3_A 36 1105 + 1070 Gaps:65 98.83 857 62.93 0.0 mol:protein length:857 LIPOXYGENASE-3
blastp_pdb 1hu9_A 36 1105 + 1070 Gaps:65 98.83 857 62.93 0.0 mol:protein length:857 LIPOXYGENASE-3
blastp_uniprot_sprot sp|Q9LUW0|LOX5_ARATH 36 1105 + 1070 Gaps:27 96.28 886 72.92 0.0 Linoleate 9S-lipoxygenase 5 chloroplastic OS Arabidopsis thaliana GN LOX5 PE 1 SV 2
blastp_uniprot_sprot sp|Q43191|LOX15_SOLTU 9 1105 + 1097 Gaps:36 99.88 862 72.59 0.0 Probable linoleate 9S-lipoxygenase 5 OS Solanum tuberosum GN LOX1.5 PE 2 SV 1
blastp_uniprot_sprot sp|Q41238|LOX16_SOLTU 33 1105 + 1073 Gaps:27 98.72 857 71.87 0.0 Linoleate 9S-lipoxygenase 6 (Fragment) OS Solanum tuberosum GN LOX1.6 PE 1 SV 1
blastp_uniprot_sprot sp|Q43190|LOX14_SOLTU 33 1105 + 1073 Gaps:27 98.37 860 71.75 0.0 Probable linoleate 9S-lipoxygenase 4 OS Solanum tuberosum GN LOX1.4 PE 2 SV 1
blastp_uniprot_sprot sp|O24379|LOX12_SOLTU 33 1105 + 1073 Gaps:28 98.37 861 71.66 0.0 Linoleate 9S-lipoxygenase 2 OS Solanum tuberosum GN LOX1.2 PE 1 SV 1
blastp_uniprot_sprot sp|P38415|LOXA_SOLLC 33 1105 + 1073 Gaps:27 98.37 860 71.39 0.0 Linoleate 9S-lipoxygenase A OS Solanum lycopersicum GN LOX1.1 PE 2 SV 1
blastp_uniprot_sprot sp|O22508|LOX18_SOLTU 33 1105 + 1073 Gaps:28 98.37 861 70.72 0.0 Probable linoleate 9S-lipoxygenase 8 OS Solanum tuberosum GN LOX1.8 PE 2 SV 1
blastp_uniprot_sprot sp|P37831|LOX11_SOLTU 33 1105 + 1073 Gaps:28 98.37 861 70.60 0.0 Linoleate 9S-lipoxygenase 1 OS Solanum tuberosum GN LOX1.1 PE 2 SV 1
blastp_uniprot_sprot sp|O22507|LOX17_SOLTU 33 1105 + 1073 Gaps:28 98.37 861 70.60 0.0 Probable linoleate 9S-lipoxygenase 7 OS Solanum tuberosum GN LOX1.7 PE 2 SV 1
blastp_uniprot_sprot sp|Q43189|LOX13_SOLTU 33 1105 + 1073 Gaps:28 98.37 861 70.72 0.0 Probable linoleate 9S-lipoxygenase 3 OS Solanum tuberosum GN LOX1.3 PE 2 SV 1

34 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 742 756 15 PS00711 none Lipoxygenases iron-binding region signature 1. IPR020833
Gene3D 605 738 134 G3DSA:3.10.450.60 none none none
ProSiteProfiles 175 330 156 PS51393 none Lipoxygenase iron-binding catalytic domain profile. IPR013819
PANTHER 60 201 142 PTHR11771:SF42 none none none
PANTHER 570 1105 536 PTHR11771:SF42 none none none
Gene3D 409 503 95 G3DSA:4.10.375.10 none none none
PRINTS 724 741 18 PR00087 none Lipoxygenase signature IPR013819
PRINTS 762 782 21 PR00087 none Lipoxygenase signature IPR013819
PRINTS 742 759 18 PR00087 none Lipoxygenase signature IPR013819
Pfam 82 171 90 PF01477 none PLAT/LH2 domain IPR001024
PANTHER 241 322 82 PTHR11771:SF42 none none none
SMART 35 173 139 SM00308 none Lipoxygenase homology 2 (beta barrel) domain IPR001024
ProSiteProfiles 37 172 136 PS50095 none PLAT domain profile. IPR001024
ProSitePatterns 769 779 11 PS00081 none Lipoxygenases iron-binding region signature 2. IPR020834
SUPERFAMILY 35 176 142 SSF49723 none none IPR008976
Gene3D 740 1105 366 G3DSA:1.20.245.10 none none none
Pfam 396 1083 688 PF00305 none Lipoxygenase IPR013819
Pfam 182 368 187 PF00305 none Lipoxygenase IPR013819
SUPERFAMILY 177 369 193 SSF48484 none none IPR013819
Gene3D 186 279 94 G3DSA:4.10.375.10 none none none
Gene3D 504 585 82 G3DSA:4.10.372.10 "UniPathway:UPA00382" none IPR027433
Gene3D 281 367 87 G3DSA:4.10.372.10 "UniPathway:UPA00382" none IPR027433
PANTHER 241 322 82 PTHR11771 none none IPR000907
SUPERFAMILY 391 1105 715 SSF48484 none none IPR013819
Gene3D 38 185 148 G3DSA:2.60.60.20 none none IPR001024
Gene3D 387 407 21 G3DSA:2.60.60.20 none none IPR001024
PRINTS 142 160 19 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 309 330 22 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 207 223 17 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246
PRINTS 240 259 20 PR00468 "UniPathway:UPA00382" Plant lipoxygenase signature IPR001246

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting