Protein : Qrob_P0276320.2 Q. robur
Protein Identifier  ? Qrob_P0276320.2 Organism . Name  Quercus robur
Score  66.0 Score Type  egn
Protein Description  (M=3) 3.6.3.3 - Cadmium-exporting ATPase. Code Enzyme  EC:3.6.3.5, EC:3.6.3.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 868  
Kegg Orthology  K01534
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

6 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0030001 metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0019829 cation-transporting ATPase activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).

46 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102625788 1 709 + 709 Gaps:3 88.78 802 73.31 0.0 cadmium/zinc-transporting ATPase HMA2-like
blastp_kegg lcl|cic:CICLE_v10000354mg 1 746 + 746 Gaps:27 99.10 774 69.36 0.0 hypothetical protein
blastp_kegg lcl|gmx:100815324 1 746 + 746 Gaps:11 83.95 885 67.16 0.0 GmHMA1a GmHMA1b cadmium/zinc-transporting ATPase 3-like
blastp_kegg lcl|tcc:TCM_039368 3 702 + 700 Gaps:2 66.35 1058 68.95 0.0 Cadmium/zinc-transporting ATPase 3 isoform 1
blastp_kegg lcl|pop:POPTR_0006s07650g 3 794 + 792 Gaps:17 91.04 871 62.80 0.0 hypothetical protein
blastp_kegg lcl|vvi:100243678 3 820 + 818 Gaps:30 93.01 873 61.95 0.0 cadmium/zinc-transporting ATPase 3-like
blastp_kegg lcl|eus:EUTSA_v10024341mg 3 847 + 845 Gaps:48 90.41 928 59.00 0.0 hypothetical protein
blastp_kegg lcl|mtr:MTR_2g036380 1 763 + 763 Gaps:14 91.80 829 63.99 0.0 Zn/Cd P(IB)-type ATPase
blastp_kegg lcl|fve:101314267 2 690 + 689 Gaps:3 64.67 1070 68.21 0.0 cadmium/zinc-transporting ATPase HMA2-like
blastp_kegg lcl|pper:PRUPE_ppa000656mg 8 708 + 701 Gaps:8 66.57 1050 67.67 0.0 hypothetical protein
blastp_pdb 3j09_B 12 698 + 687 Gaps:77 98.76 723 31.51 8e-86 mol:protein length:723 copper-exporting P-type ATPase A
blastp_pdb 3j09_A 12 698 + 687 Gaps:77 98.76 723 31.51 8e-86 mol:protein length:723 copper-exporting P-type ATPase A
blastp_pdb 3j08_B 91 698 + 608 Gaps:71 97.52 645 32.59 8e-83 mol:protein length:645 copper-exporting P-type ATPase A
blastp_pdb 3j08_A 91 698 + 608 Gaps:71 97.52 645 32.59 8e-83 mol:protein length:645 copper-exporting P-type ATPase A
blastp_pdb 3rfu_D 155 666 + 512 Gaps:23 70.24 736 34.04 4e-75 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_C 155 666 + 512 Gaps:23 70.24 736 34.04 4e-75 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_B 155 666 + 512 Gaps:23 70.24 736 34.04 4e-75 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_A 155 666 + 512 Gaps:23 70.24 736 34.04 4e-75 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3a1d_B 363 642 + 280 Gaps:19 95.82 287 39.64 2e-44 mol:protein length:287 Probable copper-exporting P-type ATPase A
blastp_pdb 3a1d_A 363 642 + 280 Gaps:19 95.82 287 39.64 2e-44 mol:protein length:287 Probable copper-exporting P-type ATPase A
blastp_uniprot_sprot sp|Q9SZW4|HMA2_ARATH 2 842 + 841 Gaps:27 88.75 951 57.11 0.0 Cadmium/zinc-transporting ATPase HMA2 OS Arabidopsis thaliana GN HMA2 PE 2 SV 1
blastp_uniprot_sprot sp|O64474|HMA4_ARATH 5 855 + 851 Gaps:49 71.84 1172 57.36 0.0 Putative cadmium/zinc-transporting ATPase HMA4 OS Arabidopsis thaliana GN HMA4 PE 1 SV 2
blastp_uniprot_sprot sp|P0CW78|HMA3B_ARATH 5 691 + 687 Gaps:5 91.05 760 59.68 0.0 Cadmium/zinc-transporting ATPase HMA3 OS Arabidopsis thaliana GN HMA3 PE 1 SV 1
blastp_uniprot_sprot sp|P0CW77|HMA3A_ARATH 5 530 + 526 Gaps:5 97.97 542 58.19 0.0 Putative inactive cadmium/zinc-transporting ATPase HMA3 OS Arabidopsis thaliana GN HMA3 PE 5 SV 1
blastp_uniprot_sprot sp|Q6GIX1|CADA_STAAR 7 694 + 688 Gaps:35 98.48 726 33.43 2e-127 Probable cadmium-transporting ATPase OS Staphylococcus aureus (strain MRSA252) GN cadA PE 3 SV 1
blastp_uniprot_sprot sp|P37386|CADA2_STAAU 7 694 + 688 Gaps:35 88.93 804 33.15 2e-124 Probable cadmium-transporting ATPase OS Staphylococcus aureus GN cadA PE 3 SV 1
blastp_uniprot_sprot sp|P20021|CADA1_STAAU 10 694 + 685 Gaps:35 97.94 727 32.16 2e-122 Probable cadmium-transporting ATPase OS Staphylococcus aureus GN cadA PE 3 SV 1
blastp_uniprot_sprot sp|P30336|CADA_BACPE 2 690 + 689 Gaps:31 98.48 723 32.87 3e-120 Probable cadmium-transporting ATPase OS Bacillus pseudofirmus (strain OF4) GN cadA PE 3 SV 2
blastp_uniprot_sprot sp|Q60048|CADA_LISMN 1 690 + 690 Gaps:34 99.58 711 32.77 5e-117 Probable cadmium-transporting ATPase OS Listeria monocytogenes GN cadA PE 1 SV 1
blastp_uniprot_sprot sp|P58414|CADA_LISMO 1 690 + 690 Gaps:24 99.58 707 31.39 1e-111 Probable cadmium-transporting ATPase OS Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN cadA PE 3 SV 1

50 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 201 286 86 SSF81653 none none none
PRINTS 609 621 13 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 236 250 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 387 401 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 531 541 11 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 585 604 20 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
Phobius 662 666 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 585 607 23 PS01229 none Hypothetical cof family signature 2. none
PRINTS 10 19 10 PR00941 none Cadmium-transporting ATPase signature IPR027256
PRINTS 271 285 15 PR00941 none Cadmium-transporting ATPase signature IPR027256
PRINTS 21 42 22 PR00941 none Cadmium-transporting ATPase signature IPR027256
PRINTS 252 268 17 PR00941 none Cadmium-transporting ATPase signature IPR027256
PRINTS 173 193 21 PR00941 none Cadmium-transporting ATPase signature IPR027256
Gene3D 409 511 103 G3DSA:3.40.1110.10 none none IPR023299
Gene3D 378 408 31 G3DSA:3.40.1110.10 none none IPR023299
Phobius 667 689 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 389 395 7 PS00154 none E1-E2 ATPases phosphorylation site. IPR018303
PANTHER 3 693 691 PTHR24093:SF126 none none IPR027265
TIGRFAM 138 688 551 TIGR01525 none ATPase-IB_hvy: heavy metal translocating P-type ATPase IPR027256
Phobius 327 331 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 352 641 290 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 134 152 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 306 326 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 7 72 66 PS50846 none Heavy-metal-associated domain profile. IPR006121
TIGRFAM 138 689 552 TIGR01512 none ATPase-IB2_Cd: cadmium-translocating P-type ATPase none
SUPERFAMILY 385 405 21 SSF56784 none none IPR023214
SUPERFAMILY 447 686 240 SSF56784 none none IPR023214
Gene3D 9 75 67 G3DSA:3.30.70.100 none none none
Gene3D 138 287 150 G3DSA:2.70.150.10 none none IPR008250
Phobius 110 129 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

6 Localization

Analysis Start End Length
TMHMM 302 324 22
TMHMM 334 356 22
TMHMM 156 173 17
TMHMM 103 125 22
TMHMM 130 152 22
TMHMM 646 668 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

0 Targeting