Protein : Qrob_P0276070.2 Q. robur
Protein Identifier  ? Qrob_P0276070.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) 3.6.3.3 - Cadmium-exporting ATPase. Code Enzyme  EC:3.6.3.5, EC:3.6.3.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 885  
Kegg Orthology  K01534
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0030001 metal ion transport The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0019829 cation-transporting ATPase activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).

46 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103323565 16 879 + 864 Gaps:16 80.79 1067 71.00 0.0 putative inactive cadmium/zinc-transporting ATPase HMA3
blastp_kegg lcl|pper:PRUPE_ppa000656mg 16 879 + 864 Gaps:33 80.48 1050 72.19 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_039368 11 880 + 870 Gaps:64 90.93 1058 68.50 0.0 Cadmium/zinc-transporting ATPase 3 isoform 1
blastp_kegg lcl|vvi:100243678 11 847 + 837 Gaps:26 97.02 873 70.25 0.0 cadmium/zinc-transporting ATPase 3-like
blastp_kegg lcl|fve:101314267 8 881 + 874 Gaps:77 88.32 1070 63.70 0.0 cadmium/zinc-transporting ATPase HMA2-like
blastp_kegg lcl|pxb:103936716 11 879 + 869 Gaps:42 81.02 1043 69.82 0.0 putative inactive cadmium/zinc-transporting ATPase HMA3
blastp_kegg lcl|mdm:103445420 11 881 + 871 Gaps:86 89.26 1043 65.20 0.0 putative inactive cadmium/zinc-transporting ATPase HMA3
blastp_kegg lcl|pop:POPTR_0006s07650g 11 777 + 767 Gaps:16 87.83 871 75.42 0.0 hypothetical protein
blastp_kegg lcl|mdm:103439485 4 879 + 876 Gaps:31 81.76 1058 67.75 0.0 putative inactive cadmium/zinc-transporting ATPase HMA3
blastp_kegg lcl|mdm:103440968 4 881 + 878 Gaps:59 89.80 1049 66.88 0.0 putative inactive cadmium/zinc-transporting ATPase HMA3
blastp_pdb 3j09_B 20 693 + 674 Gaps:78 97.37 723 32.24 4e-77 mol:protein length:723 copper-exporting P-type ATPase A
blastp_pdb 3j09_A 20 693 + 674 Gaps:78 97.37 723 32.24 4e-77 mol:protein length:723 copper-exporting P-type ATPase A
blastp_pdb 3j08_B 180 693 + 514 Gaps:56 80.93 645 36.40 2e-76 mol:protein length:645 copper-exporting P-type ATPase A
blastp_pdb 3j08_A 180 693 + 514 Gaps:56 80.93 645 36.40 2e-76 mol:protein length:645 copper-exporting P-type ATPase A
blastp_pdb 3rfu_D 164 697 + 534 Gaps:35 74.59 736 34.24 3e-74 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_C 164 697 + 534 Gaps:35 74.59 736 34.24 3e-74 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_B 164 697 + 534 Gaps:35 74.59 736 34.24 3e-74 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3rfu_A 164 697 + 534 Gaps:35 74.59 736 34.24 3e-74 mol:protein length:736 Copper efflux ATPase
blastp_pdb 3a1d_B 366 647 + 282 Gaps:17 95.82 287 40.00 5e-42 mol:protein length:287 Probable copper-exporting P-type ATPase A
blastp_pdb 3a1d_A 366 647 + 282 Gaps:17 95.82 287 40.00 5e-42 mol:protein length:287 Probable copper-exporting P-type ATPase A
blastp_uniprot_sprot sp|Q9SZW4|HMA2_ARATH 11 710 + 700 Gaps:7 74.34 951 70.58 0.0 Cadmium/zinc-transporting ATPase HMA2 OS Arabidopsis thaliana GN HMA2 PE 2 SV 1
blastp_uniprot_sprot sp|O64474|HMA4_ARATH 13 711 + 699 Gaps:7 60.24 1172 69.55 0.0 Putative cadmium/zinc-transporting ATPase HMA4 OS Arabidopsis thaliana GN HMA4 PE 1 SV 2
blastp_uniprot_sprot sp|P0CW78|HMA3B_ARATH 12 740 + 729 Gaps:9 97.11 760 64.63 0.0 Cadmium/zinc-transporting ATPase HMA3 OS Arabidopsis thaliana GN HMA3 PE 1 SV 1
blastp_uniprot_sprot sp|P0CW77|HMA3A_ARATH 12 534 + 523 Gaps:8 97.97 542 67.04 0.0 Putative inactive cadmium/zinc-transporting ATPase HMA3 OS Arabidopsis thaliana GN HMA3 PE 5 SV 1
blastp_uniprot_sprot sp|Q6GIX1|CADA_STAAR 15 695 + 681 Gaps:58 97.93 726 34.60 7e-117 Probable cadmium-transporting ATPase OS Staphylococcus aureus (strain MRSA252) GN cadA PE 3 SV 1
blastp_uniprot_sprot sp|P37386|CADA2_STAAU 3 699 + 697 Gaps:42 90.42 804 33.70 5e-116 Probable cadmium-transporting ATPase OS Staphylococcus aureus GN cadA PE 3 SV 1
blastp_uniprot_sprot sp|P20021|CADA1_STAAU 3 695 + 693 Gaps:43 99.31 727 33.52 1e-113 Probable cadmium-transporting ATPase OS Staphylococcus aureus GN cadA PE 3 SV 1
blastp_uniprot_sprot sp|P30336|CADA_BACPE 1 695 + 695 Gaps:45 99.59 723 33.06 3e-109 Probable cadmium-transporting ATPase OS Bacillus pseudofirmus (strain OF4) GN cadA PE 3 SV 2
blastp_uniprot_sprot sp|Q60048|CADA_LISMN 14 695 + 682 Gaps:36 99.30 711 33.00 9e-108 Probable cadmium-transporting ATPase OS Listeria monocytogenes GN cadA PE 1 SV 1
blastp_uniprot_sprot sp|P58414|CADA_LISMO 11 695 + 685 Gaps:51 99.29 707 32.91 2e-103 Probable cadmium-transporting ATPase OS Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN cadA PE 3 SV 1

45 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 392 398 7 PS00154 none E1-E2 ATPases phosphorylation site. IPR018303
Phobius 672 694 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 12 79 68 G3DSA:3.30.70.100 none none none
Phobius 167 186 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 187 308 122 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 329 339 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 590 606 17 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
PRINTS 622 647 26 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757
Phobius 667 671 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 590 612 23 PS01229 none Hypothetical cof family signature 2. none
Gene3D 509 652 144 G3DSA:3.40.50.1000 none none IPR023214
Gene3D 365 405 41 G3DSA:3.40.50.1000 none none IPR023214
TIGRFAM 170 668 499 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
Phobius 695 884 190 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 147 201 55 SSF81665 none none none
SUPERFAMILY 290 384 95 SSF81665 none none none
SUPERFAMILY 11 80 70 SSF55008 none none IPR006121
Phobius 139 144 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
TIGRFAM 147 693 547 TIGR01525 none ATPase-IB_hvy: heavy metal translocating P-type ATPase IPR027256
Phobius 115 119 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 389 408 20 SSF56784 none none IPR023214
SUPERFAMILY 450 691 242 SSF56784 none none IPR023214
Phobius 647 666 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 162 166 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 390 404 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 245 259 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 536 546 11 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 590 609 20 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 614 626 13 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
Pfam 170 382 213 PF00122 none E1-E2 ATPase IPR008250

6 Localization

Analysis Start End Length
TMHMM 120 142 22
TMHMM 647 666 19
TMHMM 306 328 22
TMHMM 93 110 17
TMHMM 671 693 22
TMHMM 343 365 22

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

0 Targeting