3 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0016491 | oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
GO:0055114 | oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
GO:0005507 | copper ion binding | Interacting selectively and non-covalently with copper (Cu) ions. |
41 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|tcc:TCM_042024 | 14 | 268 | + | 255 | Gaps:1 | 44.52 | 575 | 77.73 | 4e-144 | Plant L-ascorbate oxidase |
blastp_kegg | lcl|cit:102622926 | 14 | 267 | + | 254 | Gaps:3 | 43.97 | 580 | 76.86 | 1e-141 | L-ascorbate oxidase-like |
blastp_kegg | lcl|cic:CICLE_v10014733mg | 14 | 267 | + | 254 | Gaps:3 | 43.97 | 580 | 77.25 | 2e-141 | hypothetical protein |
blastp_kegg | lcl|mdm:103448151 | 17 | 268 | + | 252 | Gaps:1 | 42.76 | 587 | 74.50 | 2e-138 | L-ascorbate oxidase-like |
blastp_kegg | lcl|pxb:103937379 | 14 | 268 | + | 255 | Gaps:6 | 44.12 | 587 | 72.20 | 8e-137 | L-ascorbate oxidase-like |
blastp_kegg | lcl|pper:PRUPE_ppa003411mg | 30 | 268 | + | 239 | Gaps:1 | 41.25 | 577 | 78.57 | 4e-136 | hypothetical protein |
blastp_kegg | lcl|pmum:103330351 | 30 | 268 | + | 239 | Gaps:1 | 41.25 | 577 | 78.15 | 1e-135 | L-ascorbate oxidase-like |
blastp_kegg | lcl|fve:101306047 | 16 | 268 | + | 253 | Gaps:7 | 44.29 | 578 | 75.39 | 2e-133 | L-ascorbate oxidase-like |
blastp_kegg | lcl|vvi:100251280 | 17 | 268 | + | 252 | Gaps:4 | 43.37 | 581 | 74.21 | 7e-133 | L-ascorbate oxidase-like |
blastp_kegg | lcl|pop:POPTR_0009s16130g | 1 | 268 | + | 268 | Gaps:7 | 46.06 | 597 | 68.73 | 7e-131 | POPTRDRAFT_1086023 ascorbate oxidase precursor family protein |
blastp_pdb | 1asq_B | 35 | 268 | + | 234 | Gaps:2 | 42.03 | 552 | 71.98 | 1e-124 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1asq_A | 35 | 268 | + | 234 | Gaps:2 | 42.03 | 552 | 71.98 | 1e-124 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1asp_B | 35 | 268 | + | 234 | Gaps:2 | 42.03 | 552 | 71.98 | 1e-124 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1asp_A | 35 | 268 | + | 234 | Gaps:2 | 42.03 | 552 | 71.98 | 1e-124 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1aso_B | 35 | 268 | + | 234 | Gaps:2 | 42.03 | 552 | 71.98 | 1e-124 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1aso_A | 35 | 268 | + | 234 | Gaps:2 | 42.03 | 552 | 71.98 | 1e-124 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1aoz_B | 35 | 268 | + | 234 | Gaps:2 | 42.03 | 552 | 71.98 | 1e-124 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1aoz_A | 35 | 268 | + | 234 | Gaps:2 | 42.03 | 552 | 71.98 | 1e-124 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 3v9c_A | 50 | 256 | + | 207 | Gaps:34 | 37.47 | 499 | 38.50 | 1e-25 | mol:protein length:499 Laccase |
blastp_pdb | 3fpx_A | 50 | 256 | + | 207 | Gaps:34 | 37.47 | 499 | 38.50 | 1e-25 | mol:protein length:499 Laccase |
blastp_uniprot_sprot | sp|Q40588|ASO_TOBAC | 33 | 268 | + | 236 | Gaps:1 | 40.66 | 578 | 76.60 | 5e-130 | L-ascorbate oxidase OS Nicotiana tabacum GN AAO PE 2 SV 1 |
blastp_uniprot_sprot | sp|P24792|ASO_CUCMA | 32 | 268 | + | 237 | Gaps:2 | 40.59 | 579 | 72.34 | 6e-126 | L-ascorbate oxidase OS Cucurbita maxima GN AAO PE 1 SV 2 |
blastp_uniprot_sprot | sp|P14133|ASO_CUCSA | 15 | 268 | + | 254 | Gaps:4 | 43.27 | 587 | 69.29 | 6e-125 | L-ascorbate oxidase OS Cucumis sativus PE 1 SV 1 |
blastp_uniprot_sprot | sp|P37064|ASO_CUCPM | 35 | 268 | + | 234 | Gaps:2 | 42.03 | 552 | 71.98 | 4e-124 | L-ascorbate oxidase OS Cucurbita pepo var. melopepo PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q2QUN2|LAC24_ORYSJ | 55 | 257 | + | 203 | Gaps:37 | 32.12 | 579 | 45.70 | 9e-31 | Laccase-24 OS Oryza sativa subsp. japonica GN LAC24 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q0IP28|LAC25_ORYSJ | 57 | 220 | + | 164 | Gaps:11 | 29.29 | 577 | 42.60 | 4e-30 | Laccase-25 OS Oryza sativa subsp. japonica GN LAC25 PE 3 SV 1 |
blastp_uniprot_sprot | sp|Q5N7B4|LAC7_ORYSJ | 35 | 208 | + | 174 | Gaps:5 | 30.95 | 559 | 38.15 | 6e-28 | Laccase-7 OS Oryza sativa subsp. japonica GN LAC7 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9LMS3|LAC1_ARATH | 32 | 191 | + | 160 | Gaps:12 | 27.54 | 581 | 36.88 | 1e-27 | Laccase-1 OS Arabidopsis thaliana GN LAC1 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9SR40|LAC7_ARATH | 16 | 272 | + | 257 | Gaps:13 | 45.50 | 567 | 31.01 | 3e-27 | Laccase-7 OS Arabidopsis thaliana GN LAC7 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9SU40|SKU5_ARATH | 20 | 267 | + | 248 | Gaps:25 | 39.69 | 587 | 34.33 | 7e-27 | Monocopper oxidase-like protein SKU5 OS Arabidopsis thaliana GN SKU5 PE 1 SV 1 |
13 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Phobius | 289 | 289 | 1 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
Pfam | 173 | 267 | 95 | PF00394 | none | Multicopper oxidase | IPR001117 |
Phobius | 12 | 33 | 22 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
Pfam | 44 | 156 | 113 | PF07732 | none | Multicopper oxidase | IPR011707 |
Gene3D | 176 | 267 | 92 | G3DSA:2.60.40.420 | none | none | IPR008972 |
Phobius | 1 | 11 | 11 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
PANTHER | 19 | 267 | 249 | PTHR11709:SF28 | none | none | none |
SUPERFAMILY | 164 | 267 | 104 | SSF49503 | none | none | IPR008972 |
SUPERFAMILY | 26 | 184 | 159 | SSF49503 | none | none | IPR008972 |
Gene3D | 35 | 175 | 141 | G3DSA:2.60.40.420 | none | none | IPR008972 |
Phobius | 34 | 260 | 227 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
Phobius | 261 | 288 | 28 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
PANTHER | 19 | 267 | 249 | PTHR11709 | none | none | none |
17 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2014_nSecLBD_3P | Qrob_Chr08 | 8 | s_1BN2OD_551 | s_1B5AYF_599 | 17,17 | 0 | 43,51 | lod | 1,9229 | 4,4 |
Bourran2_2014_nLBD*_3P | Qrob_Chr08 | 8 | v_5216_549 | v_11837_70 | 12,25 | 0 | 35,55 | lod | 2,5951 | 6 |
Bourran2_2014_nP*_3P | Qrob_Chr08 | 8 | v_5216_549 | v_11837_70 | 12,19 | 0 | 31,97 | lod | 2,8472 | 6 |
Bourran2_2002_QTL11_peak_Bud_burst_A4 | Qrob_Chr06 | 6 | s_1C41PA_791 | s_1AM1AV_1141 | 19,17 | 0 | 34,57 | lod | 2,3 | 2,9 |
Bourran2_2014_aSeqBC_3P | Qrob_Chr06 | 6 | v_506_189 | v_686_77 | 30,72 | 13,58 | 43,48 | lod | 2,2746 | 6,3 |
Bourran2_2014_aSeqBC*_A4 | Qrob_Chr06 | 6 | s_2F5MK3_712 | v_444_355 | 27,13 | 14,86 | 39,46 | lod | 3,7847 | 9,8 |
Bourran2_2014_nEpis*_3P | Qrob_Chr08 | 8 | s_1DA4QW_688 | s_1DNI7D_820 | 17,96 | 0 | 37,75 | lod | 2,9745 | 7,5 |
Bourran2_2014_nEpis*_A4 | Qrob_Chr07 | 7 | v_12400_446 | s_1BPEBU_1211 | 6,93 | 0 | 15,13 | lod | 4,7411 | 11 |
Bourran2_2014_nFork*_3P | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,28 | 7,43 | 41,48 | lod | 2,4044 | 5,5 |
Bourran2_2014_nLBD_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 37,41 | 9,8 | 50,1 | lod | 1,9524 | 4,1 |
Bourran2_2014_nPriBD_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,51 | 3,36 | 51,86 | lod | 1,6747 | 3,9 |
Bourran2_2014_nPriLBD*_3P | Qrob_Chr11 | 11 | v_12066_307 | s_1B15GJ_447 | 3,37 | 0,57 | 16,17 | lod | 3,4299 | 6,9 |
Bourran2_2014_nSecLBD_A4 | Qrob_Chr07 | 7 | v_8327_222 | s_1A4WGY_363 | 16,04 | 0 | 44,69 | lod | 2,6373 | 6,5 |
Bourran2_2014_vEpiBC_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 37,55 | 14,41 | 50,01 | lod | 1,7882 | 4,8 |
Champenoux_2015_nEpis_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 26,53 | 25,47 | 27,72 | lod | 4.4 | 8.9 |
Champenoux_2015_nP_3P | Qrob_Chr06 | 6 | s_1A386O_228 | s_1AYZFS_603 | 27,03 | 26,47 | 27,34 | lod | 2.8 | 7.2 |
Bourran2_2014_nPriBD*_3P | Qrob_Chr06 | 6 | s_1B6WLL_980 | v_10064_133 | 11,49 | 0 | 31,52 | lod | 4,1208 | 9,1 |