3 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0016491 | oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
GO:0055114 | oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
GO:0005507 | copper ion binding | Interacting selectively and non-covalently with copper (Cu) ions. |
41 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|pmum:103330351 | 1 | 317 | + | 317 | Gaps:2 | 54.59 | 577 | 82.86 | 0.0 | L-ascorbate oxidase-like |
blastp_kegg | lcl|pper:PRUPE_ppa003411mg | 1 | 317 | + | 317 | Gaps:2 | 54.59 | 577 | 82.22 | 0.0 | hypothetical protein |
blastp_kegg | lcl|pxb:103937379 | 1 | 312 | + | 312 | Gaps:1 | 52.98 | 587 | 81.03 | 0.0 | L-ascorbate oxidase-like |
blastp_kegg | lcl|mdm:103448151 | 1 | 311 | + | 311 | Gaps:1 | 52.81 | 587 | 80.97 | 0.0 | L-ascorbate oxidase-like |
blastp_kegg | lcl|fve:101306047 | 1 | 309 | + | 309 | Gaps:2 | 53.46 | 578 | 79.29 | 4e-177 | L-ascorbate oxidase-like |
blastp_kegg | lcl|vvi:100251280 | 1 | 312 | + | 312 | Gaps:2 | 53.36 | 581 | 77.10 | 6e-177 | L-ascorbate oxidase-like |
blastp_kegg | lcl|cit:102622926 | 1 | 317 | + | 317 | Gaps:2 | 54.31 | 580 | 77.14 | 1e-176 | L-ascorbate oxidase-like |
blastp_kegg | lcl|tcc:TCM_042024 | 1 | 309 | + | 309 | Gaps:2 | 53.39 | 575 | 77.52 | 1e-175 | Plant L-ascorbate oxidase |
blastp_kegg | lcl|pop:POPTR_0009s16130g | 1 | 312 | + | 312 | Gaps:4 | 52.26 | 597 | 77.88 | 5e-175 | POPTRDRAFT_1086023 ascorbate oxidase precursor family protein |
blastp_kegg | lcl|tcc:TCM_042023 | 1 | 311 | + | 311 | Gaps:2 | 54.69 | 565 | 76.38 | 2e-173 | L-ascorbate oxidase |
blastp_pdb | 1asq_B | 1 | 310 | + | 310 | Gaps:2 | 55.80 | 552 | 69.16 | 6e-155 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1asq_A | 1 | 310 | + | 310 | Gaps:2 | 55.80 | 552 | 69.16 | 6e-155 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1asp_B | 1 | 310 | + | 310 | Gaps:2 | 55.80 | 552 | 69.16 | 6e-155 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1asp_A | 1 | 310 | + | 310 | Gaps:2 | 55.80 | 552 | 69.16 | 6e-155 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1aso_B | 1 | 310 | + | 310 | Gaps:2 | 55.80 | 552 | 69.16 | 6e-155 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1aso_A | 1 | 310 | + | 310 | Gaps:2 | 55.80 | 552 | 69.16 | 6e-155 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1aoz_B | 1 | 310 | + | 310 | Gaps:2 | 55.80 | 552 | 69.16 | 6e-155 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1aoz_A | 1 | 310 | + | 310 | Gaps:2 | 55.80 | 552 | 69.16 | 6e-155 | mol:protein length:552 ASCORBATE OXIDASE |
blastp_pdb | 1a65_A | 1 | 290 | + | 290 | Gaps:56 | 50.00 | 504 | 34.52 | 1e-17 | mol:protein length:504 LACCASE |
blastp_pdb | 1hfu_A | 1 | 290 | + | 290 | Gaps:56 | 50.10 | 503 | 34.52 | 1e-17 | mol:protein length:503 LACCASE 1 |
blastp_uniprot_sprot | sp|Q40588|ASO_TOBAC | 1 | 317 | + | 317 | Gaps:3 | 54.33 | 578 | 75.80 | 2e-170 | L-ascorbate oxidase OS Nicotiana tabacum GN AAO PE 2 SV 1 |
blastp_uniprot_sprot | sp|P14133|ASO_CUCSA | 1 | 309 | + | 309 | Gaps:1 | 52.47 | 587 | 71.43 | 2e-159 | L-ascorbate oxidase OS Cucumis sativus PE 1 SV 1 |
blastp_uniprot_sprot | sp|P24792|ASO_CUCMA | 1 | 310 | + | 310 | Gaps:2 | 53.20 | 579 | 69.16 | 2e-154 | L-ascorbate oxidase OS Cucurbita maxima GN AAO PE 1 SV 2 |
blastp_uniprot_sprot | sp|P37064|ASO_CUCPM | 1 | 310 | + | 310 | Gaps:2 | 55.80 | 552 | 69.16 | 2e-154 | L-ascorbate oxidase OS Cucurbita pepo var. melopepo PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9FLB5|LAC12_ARATH | 1 | 298 | + | 298 | Gaps:42 | 55.58 | 565 | 35.03 | 2e-40 | Laccase-12 OS Arabidopsis thaliana GN LAC12 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q0DHL5|LAC11_ORYSJ | 1 | 288 | + | 288 | Gaps:31 | 57.22 | 540 | 35.60 | 7e-39 | Putative laccase-11 OS Oryza sativa subsp. japonica GN LAC11 PE 5 SV 2 |
blastp_uniprot_sprot | sp|Q8RYM9|LAC2_ORYSJ | 1 | 288 | + | 288 | Gaps:20 | 52.67 | 562 | 33.11 | 2e-37 | Laccase-2 OS Oryza sativa subsp. japonica GN LAC2 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q5N9X2|LAC4_ORYSJ | 1 | 284 | + | 284 | Gaps:36 | 53.20 | 579 | 35.06 | 1e-35 | Laccase-4 OS Oryza sativa subsp. japonica GN LAC4 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q941X2|LAC3_ORYSJ | 1 | 298 | + | 298 | Gaps:38 | 55.73 | 567 | 31.96 | 2e-35 | Laccase-3 OS Oryza sativa subsp. japonica GN LAC3 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q9FY79|LAC14_ARATH | 1 | 288 | + | 288 | Gaps:40 | 52.02 | 569 | 34.46 | 1e-34 | Laccase-14 OS Arabidopsis thaliana GN LAC14 PE 2 SV 1 |
10 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
PANTHER | 1 | 308 | 308 | PTHR11709 | none | none | none |
PANTHER | 1 | 308 | 308 | PTHR11709:SF28 | none | none | none |
Gene3D | 103 | 296 | 194 | G3DSA:2.60.40.420 | none | none | IPR008972 |
ProSitePatterns | 268 | 288 | 21 | PS00079 | none | Multicopper oxidases signature 1. | IPR002355 |
SUPERFAMILY | 104 | 303 | 200 | SSF49503 | none | none | IPR008972 |
Pfam | 1 | 65 | 65 | PF00394 | none | Multicopper oxidase | IPR001117 |
Gene3D | 1 | 97 | 97 | G3DSA:2.60.40.420 | none | none | IPR008972 |
SUPERFAMILY | 1 | 101 | 101 | SSF49503 | none | none | IPR008972 |
ProSitePatterns | 273 | 284 | 12 | PS00080 | none | Multicopper oxidases signature 2. | IPR002355 |
Pfam | 167 | 292 | 126 | PF07731 | none | Multicopper oxidase | IPR011706 |
17 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2014_nSecLBD_3P | Qrob_Chr08 | 8 | s_1BN2OD_551 | s_1B5AYF_599 | 17,17 | 0 | 43,51 | lod | 1,9229 | 4,4 |
Bourran2_2014_nLBD*_3P | Qrob_Chr08 | 8 | v_5216_549 | v_11837_70 | 12,25 | 0 | 35,55 | lod | 2,5951 | 6 |
Bourran2_2014_nP*_3P | Qrob_Chr08 | 8 | v_5216_549 | v_11837_70 | 12,19 | 0 | 31,97 | lod | 2,8472 | 6 |
Bourran2_2002_QTL11_peak_Bud_burst_A4 | Qrob_Chr06 | 6 | s_1C41PA_791 | s_1AM1AV_1141 | 19,17 | 0 | 34,57 | lod | 2,3 | 2,9 |
Bourran2_2014_aSeqBC_3P | Qrob_Chr06 | 6 | v_506_189 | v_686_77 | 30,72 | 13,58 | 43,48 | lod | 2,2746 | 6,3 |
Bourran2_2014_aSeqBC*_A4 | Qrob_Chr06 | 6 | s_2F5MK3_712 | v_444_355 | 27,13 | 14,86 | 39,46 | lod | 3,7847 | 9,8 |
Bourran2_2014_nEpis*_3P | Qrob_Chr08 | 8 | s_1DA4QW_688 | s_1DNI7D_820 | 17,96 | 0 | 37,75 | lod | 2,9745 | 7,5 |
Bourran2_2014_nEpis*_A4 | Qrob_Chr07 | 7 | v_12400_446 | s_1BPEBU_1211 | 6,93 | 0 | 15,13 | lod | 4,7411 | 11 |
Bourran2_2014_nFork*_3P | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,28 | 7,43 | 41,48 | lod | 2,4044 | 5,5 |
Bourran2_2014_nLBD_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 37,41 | 9,8 | 50,1 | lod | 1,9524 | 4,1 |
Bourran2_2014_nPriBD_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,51 | 3,36 | 51,86 | lod | 1,6747 | 3,9 |
Bourran2_2014_nPriLBD*_3P | Qrob_Chr11 | 11 | v_12066_307 | s_1B15GJ_447 | 3,37 | 0,57 | 16,17 | lod | 3,4299 | 6,9 |
Bourran2_2014_nSecLBD_A4 | Qrob_Chr07 | 7 | v_8327_222 | s_1A4WGY_363 | 16,04 | 0 | 44,69 | lod | 2,6373 | 6,5 |
Bourran2_2014_vEpiBC_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 37,55 | 14,41 | 50,01 | lod | 1,7882 | 4,8 |
Champenoux_2015_nEpis_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 26,53 | 25,47 | 27,72 | lod | 4.4 | 8.9 |
Champenoux_2015_nP_3P | Qrob_Chr06 | 6 | s_1A386O_228 | s_1AYZFS_603 | 27,03 | 26,47 | 27,34 | lod | 2.8 | 7.2 |
Bourran2_2014_nPriBD*_3P | Qrob_Chr06 | 6 | s_1B6WLL_980 | v_10064_133 | 11,49 | 0 | 31,52 | lod | 4,1208 | 9,1 |