Protein : Qrob_P0231260.2 Q. robur
Protein Identifier  ? Qrob_P0231260.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K17732 - mitochondrial-processing peptidase subunit beta [EC:3.4.24.64] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 531  
Kegg Orthology  K17732
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0004222 metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103492903 1 530 + 530 Gaps:2 100.00 528 88.26 0.0 probable mitochondrial-processing peptidase subunit beta
blastp_kegg lcl|csv:101222695 1 530 + 530 Gaps:2 100.00 528 88.64 0.0 probable mitochondrial-processing peptidase subunit beta-like
blastp_kegg lcl|cit:102627284 1 530 + 530 none 100.00 530 88.11 0.0 probable mitochondrial-processing peptidase subunit beta-like
blastp_kegg lcl|cic:CICLE_v10011465mg 1 530 + 530 none 100.00 530 87.92 0.0 hypothetical protein
blastp_kegg lcl|vvi:100259477 1 530 + 530 Gaps:7 100.00 523 87.76 0.0 probable mitochondrial-processing peptidase subunit beta-like
blastp_kegg lcl|tcc:TCM_018718 1 530 + 530 Gaps:1 100.00 531 84.37 0.0 Insulinase (Peptidase family M16) protein isoform 1
blastp_kegg lcl|cam:101503701 1 530 + 530 Gaps:4 100.00 530 85.66 0.0 probable mitochondrial-processing peptidase subunit beta-like
blastp_kegg lcl|gmx:100811552 49 530 + 482 none 91.29 528 88.80 0.0 probable mitochondrial-processing peptidase subunit beta-like
blastp_kegg lcl|gmx:100800696 50 530 + 481 none 91.97 523 89.40 0.0 probable mitochondrial-processing peptidase subunit beta-like
blastp_kegg lcl|pop:POPTR_0017s12800g 1 530 + 530 Gaps:3 100.00 527 84.25 0.0 POPTRDRAFT_736441 mitochondrial processing peptidase beta subunit family protein
blastp_pdb 2ybb_A 92 530 + 439 Gaps:6 97.98 446 44.62 9e-146 mol:protein length:446 CYTOCHROME B-C1 COMPLEX SUBUNIT 1 MITOCHONDR
blastp_pdb 3bcc_A 92 530 + 439 Gaps:10 97.98 446 46.22 5e-146 mol:protein length:446 UBIQUINOL CYTOCHROME C OXIDOREDUCTASE
blastp_pdb 2bcc_A 92 530 + 439 Gaps:10 97.98 446 46.22 5e-146 mol:protein length:446 UBIQUINOL CYTOCHROME C OXIDOREDUCTASE
blastp_pdb 1bcc_A 92 530 + 439 Gaps:10 97.98 446 46.22 5e-146 mol:protein length:446 UBIQUINOL CYTOCHROME C OXIDOREDUCTASE
blastp_pdb 1sqp_A 92 530 + 439 Gaps:6 91.04 480 44.62 8e-146 mol:protein length:480 Ubiquinol-cytochrome-c reductase complex core
blastp_pdb 1sqb_A 92 530 + 439 Gaps:6 91.04 480 44.62 8e-146 mol:protein length:480 Ubiquinol-cytochrome C reductase complex core
blastp_pdb 2ybb_a 92 530 + 439 Gaps:6 97.98 446 44.62 9e-146 mol:protein length:446 CYTOCHROME B-C1 COMPLEX SUBUNIT 1 MITOCHONDR
blastp_pdb 2fyu_A 92 530 + 439 Gaps:6 97.98 446 44.62 9e-146 mol:protein length:446 Ubiquinol-cytochrome-c reductase complex core
blastp_pdb 2a06_N 92 530 + 439 Gaps:6 97.98 446 44.62 9e-146 mol:protein length:446 Ubiquinol-cytochrome-c reductase complex core
blastp_pdb 2a06_A 92 530 + 439 Gaps:6 97.98 446 44.62 9e-146 mol:protein length:446 Ubiquinol-cytochrome-c reductase complex core
blastp_uniprot_sprot sp|Q42290|MPPB_ARATH 1 530 + 530 Gaps:5 100.00 531 80.41 0.0 Probable mitochondrial-processing peptidase subunit beta OS Arabidopsis thaliana GN At3g02090 PE 1 SV 2
blastp_uniprot_sprot sp|Q3SZ71|MPPB_BOVIN 90 527 + 438 Gaps:5 88.78 490 54.48 2e-170 Mitochondrial-processing peptidase subunit beta OS Bos taurus GN PMPCB PE 2 SV 1
blastp_uniprot_sprot sp|Q03346|MPPB_RAT 90 529 + 440 Gaps:7 89.37 489 54.23 5e-169 Mitochondrial-processing peptidase subunit beta OS Rattus norvegicus GN Pmpcb PE 1 SV 3
blastp_uniprot_sprot sp|O75439|MPPB_HUMAN 90 529 + 440 Gaps:3 89.37 489 53.09 2e-168 Mitochondrial-processing peptidase subunit beta OS Homo sapiens GN PMPCB PE 1 SV 2
blastp_uniprot_sprot sp|Q5REK3|MPPB_PONAB 90 529 + 440 Gaps:3 89.37 489 53.09 2e-168 Mitochondrial-processing peptidase subunit beta OS Pongo abelii GN PMPCB PE 2 SV 1
blastp_uniprot_sprot sp|Q9CXT8|MPPB_MOUSE 90 529 + 440 Gaps:3 89.37 489 53.55 1e-167 Mitochondrial-processing peptidase subunit beta OS Mus musculus GN Pmpcb PE 2 SV 1
blastp_uniprot_sprot sp|P11913|MPPB_NEUCR 56 522 + 467 Gaps:12 96.43 476 54.03 2e-167 Mitochondrial-processing peptidase subunit beta OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN pep PE 1 SV 1
blastp_uniprot_sprot sp|Q00302|MPPB_BLAEM 90 530 + 441 Gaps:6 93.98 465 54.46 7e-156 Mitochondrial-processing peptidase subunit beta OS Blastocladiella emersonii GN MPP1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9Y8B5|MPPB_LENED 93 522 + 430 Gaps:3 92.92 466 52.89 2e-155 Mitochondrial-processing peptidase subunit beta OS Lentinula edodes GN mppB PE 3 SV 1
blastp_uniprot_sprot sp|Q4W6B5|MPPB_DICDI 93 529 + 437 Gaps:2 93.18 469 48.51 4e-151 Mitochondrial-processing peptidase subunit beta OS Dictyostelium discoideum GN mppB PE 1 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 106 253 148 PF00675 none Insulinase (Peptidase family M16) IPR011765
Phobius 1 15 15 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 25 42 18 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 260 445 186 PF05193 none Peptidase M16 inactive domain IPR007863
Phobius 43 530 488 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 90 529 440 PTHR11851 none none none
Phobius 1 42 42 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 90 529 440 PTHR11851:SF103 none none none
Gene3D 97 306 210 G3DSA:3.30.830.10 none none IPR011237
SUPERFAMILY 92 299 208 SSF63411 none none IPR011249
Phobius 16 24 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSitePatterns 127 150 24 PS00143 none Insulinase family, zinc-binding region signature. IPR001431
SUPERFAMILY 320 524 205 SSF63411 none none IPR011249
Gene3D 313 529 217 G3DSA:3.30.830.10 none none IPR011237
Coils 155 176 22 Coil none none none

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 42 41

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 27   Mitochondrion 1 0.014 0.967 NON-PLANT 27