Protein : Qrob_P0216350.2 Q. robur
Protein Identifier  ? Qrob_P0216350.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR31707:SF3 - PECTINESTERASE/PECTINESTERASE INHIBITOR 13-RELATED (PTHR31707:SF3) Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 566  
Kegg Orthology  K01051
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_021494 1 560 + 560 Gaps:12 95.81 597 66.78 0.0 Plant invertase/pectin methylesterase inhibitor superfamily putative
blastp_kegg lcl|vvi:100242515 3 560 + 558 Gaps:8 98.95 570 66.67 0.0 putative pectinesterase/pectinesterase inhibitor 28-like
blastp_kegg lcl|sot:102600068 3 560 + 558 Gaps:21 99.14 584 63.90 0.0 putative pectinesterase/pectinesterase inhibitor 45-like
blastp_kegg lcl|sly:101253120 3 560 + 558 Gaps:22 99.15 585 63.79 0.0 probable pectinesterase/pectinesterase inhibitor 13-like
blastp_kegg lcl|pmum:103323313 32 560 + 529 Gaps:6 94.19 568 67.29 0.0 pectinesterase-like
blastp_kegg lcl|pper:PRUPE_ppa003528mg 32 560 + 529 Gaps:6 94.19 568 67.10 0.0 hypothetical protein
blastp_kegg lcl|pxb:103959085 3 560 + 558 Gaps:9 98.94 567 64.53 0.0 pectinesterase-like
blastp_kegg lcl|pxb:103950325 3 560 + 558 Gaps:9 98.94 567 64.35 0.0 pectinesterase-like
blastp_kegg lcl|mdm:103452731 3 560 + 558 Gaps:10 98.94 566 64.46 0.0 pectinesterase-like
blastp_kegg lcl|vvi:100245002 1 560 + 560 Gaps:7 99.65 565 61.63 0.0 probable pectinesterase/pectinesterase inhibitor 21-like
blastp_pdb 1gq8_A 245 559 + 315 none 98.75 319 53.02 2e-119 mol:protein length:319 PECTINESTERASE
blastp_pdb 1xg2_A 248 559 + 312 none 98.42 317 50.00 4e-109 mol:protein length:317 Pectinesterase 1
blastp_pdb 1qjv_B 248 516 + 269 Gaps:59 90.64 342 30.00 1e-20 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 248 516 + 269 Gaps:59 90.64 342 30.00 1e-20 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 2ntq_B 248 513 + 266 Gaps:59 89.77 342 29.97 4e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 248 513 + 266 Gaps:59 89.77 342 29.97 4e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 248 513 + 266 Gaps:59 89.77 342 29.97 4e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 248 513 + 266 Gaps:59 89.77 342 29.97 4e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 248 513 + 266 Gaps:59 89.77 342 29.97 4e-20 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 248 513 + 266 Gaps:59 89.77 342 29.97 4e-20 mol:protein length:342 Pectinesterase A
blastp_uniprot_sprot sp|Q8GX86|PME21_ARATH 3 559 + 557 Gaps:17 82.51 669 44.75 8e-174 Probable pectinesterase/pectinesterase inhibitor 21 OS Arabidopsis thaliana GN PME21 PE 2 SV 2
blastp_uniprot_sprot sp|Q3E8Z8|PME28_ARATH 3 559 + 557 Gaps:15 74.86 732 43.98 3e-171 Putative pectinesterase/pectinesterase inhibitor 28 OS Arabidopsis thaliana GN PME28 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJ21|PME58_ARATH 3 560 + 558 Gaps:19 98.25 571 46.35 6e-170 Probable pectinesterase/pectinesterase inhibitor 58 OS Arabidopsis thaliana GN PME58 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SMY6|PME45_ARATH 42 559 + 518 Gaps:14 84.40 609 49.03 3e-167 Putative pectinesterase/pectinesterase inhibitor 45 OS Arabidopsis thaliana GN PME45 PE 2 SV 1
blastp_uniprot_sprot sp|Q7Y201|PME13_ARATH 42 559 + 518 Gaps:19 82.25 614 49.50 9e-167 Probable pectinesterase/pectinesterase inhibitor 13 OS Arabidopsis thaliana GN PME13 PE 2 SV 2
blastp_uniprot_sprot sp|P83948|PME3_CITSI 14 559 + 546 Gaps:21 93.32 584 44.22 3e-159 Pectinesterase 3 OS Citrus sinensis PE 1 SV 1
blastp_uniprot_sprot sp|O04886|PME1_CITSI 14 559 + 546 Gaps:21 93.32 584 44.77 2e-157 Pectinesterase 1 OS Citrus sinensis GN PECS-1.1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GXA1|PME23_ARATH 3 555 + 553 Gaps:34 97.71 568 45.95 5e-157 Probable pectinesterase/pectinesterase inhibitor 23 OS Arabidopsis thaliana GN PME23 PE 2 SV 3
blastp_uniprot_sprot sp|Q43143|PMEU1_SOLLC 3 559 + 557 Gaps:29 96.74 583 42.02 5e-151 Pectinesterase/pectinesterase inhibitor U1 OS Solanum lycopersicum GN PMEU1 PE 2 SV 1
blastp_uniprot_sprot sp|Q42534|PME2_ARATH 19 557 + 539 Gaps:31 93.70 587 42.91 5e-146 Pectinesterase 2 OS Arabidopsis thaliana GN PME2 PE 2 SV 2

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 273 292 20 PS00800 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 1. IPR018040
Phobius 21 565 545 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 246 556 311 G3DSA:2.160.20.10 none none IPR012334
SUPERFAMILY 245 557 313 SSF51126 none none IPR011050
ProSitePatterns 392 401 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
SUPERFAMILY 42 195 154 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 40 194 155 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Pfam 39 190 152 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Phobius 16 20 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 248 545 298 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 1 561 561 PTHR31707 none none none
SMART 39 190 152 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
TIGRFAM 22 194 173 TIGR01614 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" PME_inhib: pectinesterase inhibitor domain IPR006501
PANTHER 1 561 561 PTHR31707:SF3 none none none

2 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 30 29
TMHMM 5 27 22

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 20   Secretory pathway 1 0.945 0.029 NON-PLANT 20