Protein : Qrob_P0086520.2 Q. robur
Protein Identifier  ? Qrob_P0086520.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) 4.1.1.1 - Pyruvate decarboxylase. Code Enzyme  EC:4.1.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 586  
Kegg Orthology  K01568
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016831 carboxy-lyase activity Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
GO:0030976 thiamine pyrophosphate binding Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102577973 1 585 + 585 Gaps:4 100.00 589 88.29 0.0 pyruvate decarboxylase (EC:4.1.1.1)
blastp_kegg lcl|pop:POPTR_0011s07630g 1 585 + 585 Gaps:10 100.00 593 88.70 0.0 POPTRDRAFT_1094038 pyruvate decarboxylase family protein
blastp_kegg lcl|tcc:TCM_029740 1 585 + 585 Gaps:4 100.00 589 87.61 0.0 Pyruvate decarboxylase-2 isoform 1
blastp_kegg lcl|pxb:103944123 1 585 + 585 Gaps:2 100.00 587 87.39 0.0 pyruvate decarboxylase 1
blastp_kegg lcl|vvi:100242845 19 585 + 567 Gaps:1 98.09 577 90.28 0.0 pyruvate decarboxylase-2-like
blastp_kegg lcl|pop:POPTR_0004s05330g 9 585 + 577 none 99.14 582 89.25 0.0 POPTRDRAFT_817822 pyruvate decarboxylase family protein
blastp_kegg lcl|pper:PRUPE_ppa003458mg 17 585 + 569 none 99.30 573 89.63 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_006G177600g 1 585 + 585 Gaps:1 100.00 584 87.33 0.0 hypothetical protein
blastp_kegg lcl|gmx:100809553 1 585 + 585 Gaps:4 100.00 589 87.61 0.0 pyruvate decarboxylase 1-like
blastp_kegg lcl|pmum:103324867 17 585 + 569 none 99.30 573 89.10 0.0 pyruvate decarboxylase 1
blastp_pdb 2vbi_H 24 580 + 557 Gaps:9 97.17 566 44.18 3e-151 mol:protein length:566 PYRUVATE DECARBOXYLASE
blastp_pdb 2vbi_G 24 580 + 557 Gaps:9 97.17 566 44.18 3e-151 mol:protein length:566 PYRUVATE DECARBOXYLASE
blastp_pdb 2vbi_F 24 580 + 557 Gaps:9 97.17 566 44.18 3e-151 mol:protein length:566 PYRUVATE DECARBOXYLASE
blastp_pdb 2vbi_E 24 580 + 557 Gaps:9 97.17 566 44.18 3e-151 mol:protein length:566 PYRUVATE DECARBOXYLASE
blastp_pdb 2vbi_D 24 580 + 557 Gaps:9 97.17 566 44.18 3e-151 mol:protein length:566 PYRUVATE DECARBOXYLASE
blastp_pdb 2vbi_C 24 580 + 557 Gaps:9 97.17 566 44.18 3e-151 mol:protein length:566 PYRUVATE DECARBOXYLASE
blastp_pdb 2vbi_B 24 580 + 557 Gaps:9 97.17 566 44.18 3e-151 mol:protein length:566 PYRUVATE DECARBOXYLASE
blastp_pdb 2vbi_A 24 580 + 557 Gaps:9 97.17 566 44.18 3e-151 mol:protein length:566 PYRUVATE DECARBOXYLASE
blastp_pdb 2wvh_Z 24 582 + 559 Gaps:15 98.59 568 43.57 5e-144 mol:protein length:568 PYRUVATE DECARBOXYLASE
blastp_pdb 2wvh_Y 24 582 + 559 Gaps:15 98.59 568 43.57 5e-144 mol:protein length:568 PYRUVATE DECARBOXYLASE
blastp_uniprot_sprot sp|P51850|PDC1_PEA 9 585 + 577 none 97.30 593 88.39 0.0 Pyruvate decarboxylase 1 OS Pisum sativum GN PDC1 PE 1 SV 1
blastp_uniprot_sprot sp|A2XFI3|PDC2_ORYSI 11 585 + 575 Gaps:2 94.55 606 82.90 0.0 Pyruvate decarboxylase 2 OS Oryza sativa subsp. indica GN PDC2 PE 2 SV 2
blastp_uniprot_sprot sp|Q10MW3|PDC2_ORYSJ 11 585 + 575 Gaps:3 94.55 605 83.04 0.0 Pyruvate decarboxylase 2 OS Oryza sativa subsp. japonica GN PDC2 PE 2 SV 1
blastp_uniprot_sprot sp|A2Y5L9|PDC1_ORYSI 3 585 + 583 Gaps:6 97.36 605 79.12 0.0 Pyruvate decarboxylase 1 OS Oryza sativa subsp. indica GN PDC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FFT4|PDC2_ARATH 7 585 + 579 Gaps:5 95.88 607 82.13 0.0 Pyruvate decarboxylase 2 OS Arabidopsis thaliana GN PDC2 PE 1 SV 1
blastp_uniprot_sprot sp|Q0DHF6|PDC1_ORYSJ 3 585 + 583 Gaps:6 97.36 605 78.95 0.0 Pyruvate decarboxylase 1 OS Oryza sativa subsp. japonica GN PDC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M040|PDC4_ARATH 4 585 + 582 Gaps:1 96.35 603 81.07 0.0 Pyruvate decarboxylase 4 OS Arabidopsis thaliana GN PDC4 PE 2 SV 1
blastp_uniprot_sprot sp|O82647|PDC1_ARATH 8 585 + 578 Gaps:6 96.21 607 80.65 0.0 Pyruvate decarboxylase 1 OS Arabidopsis thaliana GN PDC1 PE 2 SV 1
blastp_uniprot_sprot sp|P28516|PDC1_MAIZE 25 585 + 561 none 91.97 610 81.28 0.0 Pyruvate decarboxylase 1 OS Zea mays GN PDC1 PE 2 SV 1
blastp_uniprot_sprot sp|P51846|PDC2_TOBAC 24 585 + 562 Gaps:26 95.77 614 79.76 0.0 Pyruvate decarboxylase 2 OS Nicotiana tabacum GN PDC2 PE 1 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 24 202 179 SSF52518 none none IPR029061
PIRSF 20 580 561 PIRSF036565 none none IPR012110
SUPERFAMILY 386 578 193 SSF52518 none none IPR029061
Pfam 24 187 164 PF02776 none Thiamine pyrophosphate enzyme, N-terminal TPP binding domain IPR012001
Gene3D 212 371 160 G3DSA:3.40.50.1220 none none IPR029035
PANTHER 1 584 584 PTHR18968:SF121 none none none
Pfam 221 329 109 PF00205 none Thiamine pyrophosphate enzyme, central domain IPR012000
PANTHER 1 584 584 PTHR18968 none none none
Pfam 431 556 126 PF02775 none Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IPR011766
Gene3D 24 204 181 G3DSA:3.40.50.970 none none IPR029061
SUPERFAMILY 210 361 152 SSF52467 none none IPR029035
Gene3D 382 571 190 G3DSA:3.40.50.970 none none IPR029061

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

0 Targeting