Protein : Qrob_P0082320.2 Q. robur
Protein Identifier  ? Qrob_P0082320.2 Organism . Name  Quercus robur
Score  76.0 Score Type  egn
Protein Description  (M=1) K11324 - DNA methyltransferase 1-associated protein 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 658  
Kegg Orthology  K11324
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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0009055 electron carrier activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
GO:0006281 DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO:0006338 chromatin remodeling Dynamic structural changes to eukaryotic chromatin occurring throughout the cell division cycle. These changes range from the local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation.
GO:0035267 NuA4 histone acetyltransferase complex A complex having histone acetylase activity on chromatin, as well as ATPase, DNA helicase and structural DNA binding activities. The complex is thought to be involved in double-strand DNA break repair. Subunits of the human complex include HTATIP/TIP60, TRRAP, RUVBL1, BUVBL2, beta-actin and BAF53/ACTL6A. In yeast, the complex has 13 subunits, including the catalytic subunit Esa1 (homologous to human Tip60).
GO:0043967 histone H4 acetylation The modification of histone H4 by the addition of an acetyl group.
GO:0043968 histone H2A acetylation The modification of histone H2A by the addition of an acetyl group.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10020117mg 1 657 + 657 Gaps:8 99.78 450 83.74 9e-175 hypothetical protein
blastp_kegg lcl|cit:102615873 1 657 + 657 Gaps:8 99.78 450 83.74 9e-175 SWR1-complex protein 4-like
blastp_kegg lcl|tcc:TCM_004872 1 657 + 657 Gaps:8 99.78 450 83.07 2e-169 Myb-like transcription factor family protein isoform 1
blastp_kegg lcl|vvi:100265771 1 656 + 656 Gaps:10 99.78 445 81.76 1e-167 SWR1-complex protein 4-like
blastp_kegg lcl|sot:102592914 1 656 + 656 Gaps:11 99.55 449 78.30 4e-162 DNA methyltransferase 1-associated protein 1-like
blastp_kegg lcl|rcu:RCOM_1345900 4 657 + 654 Gaps:11 98.89 450 82.25 6e-162 DNA methyltransferase 1-associated protein putative
blastp_kegg lcl|pper:PRUPE_ppa005762mg 1 657 + 657 Gaps:19 99.78 445 81.76 2e-161 hypothetical protein
blastp_kegg lcl|sly:101262045 1 656 + 656 Gaps:13 99.55 448 77.80 3e-158 DNA methyltransferase 1-associated protein 1-like
blastp_kegg lcl|pop:POPTR_0014s11270g 1 657 + 657 Gaps:15 99.77 443 80.54 3e-158 POPTRDRAFT_807470 myb family transcription factor family protein
blastp_kegg lcl|pvu:PHAVU_001G214900g 1 657 + 657 Gaps:18 99.77 438 81.24 2e-155 hypothetical protein
blastp_pdb 3hm5_A 243 396 + 154 Gaps:9 79.57 93 48.65 6e-14 mol:protein length:93 DNA methyltransferase 1-associated protein 1
blastp_pdb 3l75_P 125 241 + 117 Gaps:6 31.84 380 36.36 1e-13 mol:protein length:380 CYTOCHROME B
blastp_pdb 3l75_C 125 241 + 117 Gaps:6 31.84 380 36.36 1e-13 mol:protein length:380 CYTOCHROME B
blastp_pdb 3l74_P 125 241 + 117 Gaps:6 31.84 380 36.36 1e-13 mol:protein length:380 CYTOCHROME B
blastp_pdb 3l74_C 125 241 + 117 Gaps:6 31.84 380 36.36 1e-13 mol:protein length:380 CYTOCHROME B
blastp_pdb 3l73_P 125 241 + 117 Gaps:6 31.84 380 36.36 1e-13 mol:protein length:380 CYTOCHROME B
blastp_pdb 3l73_C 125 241 + 117 Gaps:6 31.84 380 36.36 1e-13 mol:protein length:380 CYTOCHROME B
blastp_pdb 3l72_P 125 241 + 117 Gaps:6 31.84 380 36.36 1e-13 mol:protein length:380 CYTOCHROME B
blastp_pdb 3l72_C 125 241 + 117 Gaps:6 31.84 380 36.36 1e-13 mol:protein length:380 CYTOCHROME B
blastp_pdb 3l71_P 125 241 + 117 Gaps:6 31.84 380 36.36 1e-13 mol:protein length:380 Cytochrome b
blastp_uniprot_sprot sp|Q9ZZT8|CYB_PEA 161 251 + 91 Gaps:6 24.74 392 84.54 1e-37 Cytochrome b OS Pisum sativum GN MT-CYB PE 3 SV 1
blastp_uniprot_sprot sp|P05718|CYB_VICFA 161 251 + 91 Gaps:3 23.98 392 85.11 2e-37 Cytochrome b OS Vicia faba GN MT-CYB PE 3 SV 2
blastp_uniprot_sprot sp|P29757|CYB_SOLTU 148 242 + 95 Gaps:1 23.92 393 82.98 1e-34 Cytochrome b OS Solanum tuberosum GN MT-CYB PE 1 SV 4
blastp_uniprot_sprot sp|P26852|CYB_MARPO 148 242 + 95 Gaps:1 23.27 404 70.21 2e-34 Cytochrome b OS Marchantia polymorpha GN MT-CYB PE 3 SV 2
blastp_uniprot_sprot sp|P42792|CYB_ARATH 161 242 + 82 none 20.87 393 91.46 5e-34 Cytochrome b OS Arabidopsis thaliana GN MT-CYB PE 2 SV 2
blastp_uniprot_sprot sp|P09843|CYB_OENBE 161 242 + 82 none 20.81 394 91.46 1e-33 Cytochrome b OS Oenothera berteroana GN MT-CYB PE 2 SV 4
blastp_uniprot_sprot sp|P07747|CYB_WHEAT 161 251 + 91 Gaps:3 23.62 398 81.91 1e-31 Cytochrome b OS Triticum aestivum GN MT-CYB PE 2 SV 3
blastp_uniprot_sprot sp|Q94S37|CYB_DAUCA 148 242 + 95 Gaps:2 23.87 398 73.68 7e-29 Cytochrome b OS Daucus carota GN MT-CYB PE 3 SV 1
blastp_uniprot_sprot sp|P04165|CYB_MAIZE 148 250 + 103 Gaps:4 27.06 388 76.19 2e-27 Cytochrome b OS Zea mays GN MT-CYB PE 3 SV 2
blastp_uniprot_sprot sp|P0C524|CYB_ORYSJ 161 251 + 91 Gaps:3 23.68 397 82.98 2e-26 Cytochrome b OS Oryza sativa subsp. japonica GN MT-CYB PE 2 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 212 216 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 180 190 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 128 128 PTHR12855 none none IPR027109
PANTHER 340 580 241 PTHR12855 none none IPR027109
Phobius 217 236 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 159 179 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 339 385 47 G3DSA:1.10.10.60 none none IPR009057
Gene3D 245 288 44 G3DSA:1.10.10.60 none none IPR009057
Phobius 237 657 421 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 128 128 PTHR12855:SF10 none none none
PANTHER 340 580 241 PTHR12855:SF10 none none none
SMART 240 289 50 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
SMART 337 386 50 SM00717 none SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains IPR001005
SUPERFAMILY 334 387 54 SSF46689 none none IPR009057
SUPERFAMILY 243 287 45 SSF46689 none none IPR009057
ProSiteProfiles 152 251 100 PS51003 none Cytochrome b/b6 C-terminal region profile. IPR005798
Phobius 1 158 158 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 191 211 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 158 245 88 SSF81648 none none IPR005798
Pfam 160 231 72 PF00032 none Cytochrome b(C-terminal)/b6/petD IPR005798
Gene3D 156 244 89 G3DSA:1.20.810.10 none none IPR027387

3 Localization

Analysis Start End Length
TMHMM 194 212 18
TMHMM 157 179 22
TMHMM 219 241 22

0 Qtllist

0 Targeting