Protein : Qrob_P0028520.2 Q. robur
Protein Identifier  ? Qrob_P0028520.2 Organism . Name  Quercus robur
Score  39.0 Score Type  egn
Protein Description  (M=3) 1.97.1.12 - Photosystem I. Code Enzyme  EC:1.97.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 115  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0009522 photosystem I A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0009579 thylakoid A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, membrane-bounded disk-like structures located in the chloroplasts; in the chloroplasts of higher plants the thylakoids form dense stacks called grana. Isolated thylakoid preparations can carry out photosynthetic electron transport and the associated phosphorylation.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:10251513 1 113 + 113 Gaps:8 16.13 750 78.51 2e-52 psaA FvH4_C0035 photosystem I P700 apoprotein A1
blastp_kegg lcl|atr:AmtrCp022 19 113 + 95 none 12.67 750 94.74 3e-52 psaA ycf3 PSI P700 apoprotein A1
blastp_kegg lcl|atr:s00334p00015340 1 113 + 113 Gaps:8 19.36 625 77.69 7e-52 AMTR_s00334p00015340 hypothetical protein
blastp_kegg lcl|sot:4099969 19 113 + 95 none 12.67 750 94.74 1e-51 psaA SotuCp021 photosystem I P700 apoprotein A1
blastp_kegg lcl|sly:3950484 19 113 + 95 none 12.67 750 94.74 1e-51 psaA LyesC2p069 photosystem I P700 apoprotein A1
blastp_kegg lcl|pmum:18668025 1 113 + 113 Gaps:8 16.13 750 77.69 2e-51 psaA CP95_p067 photosystem I P700 apoprotein A1
blastp_kegg lcl|pper:PrpeC_p021 1 113 + 113 Gaps:8 16.13 750 77.69 2e-51 psaA photosystem I P700 apoprotein A1
blastp_kegg lcl|vvi:4025091 19 113 + 95 none 12.67 750 94.74 2e-51 psaA ViviCp021 photosystem I P700 chlorophyll a apoprotein A1
blastp_kegg lcl|pop:Poptr_cp022 1 113 + 113 Gaps:8 16.13 750 77.69 2e-51 psaA photosystem I P700 chlorophyll a apoprotein A1
blastp_kegg lcl|mtr:MTR_141s0031 19 113 + 95 none 15.83 600 93.68 3e-51 Photosystem I P700 chlorophyll a apoprotein
blastp_pdb 2wsf_A 1 113 + 113 Gaps:8 15.96 758 76.03 3e-52 mol:protein length:758 PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A
blastp_pdb 2wse_A 1 113 + 113 Gaps:8 15.96 758 76.03 3e-52 mol:protein length:758 PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A
blastp_pdb 2wsc_A 1 113 + 113 Gaps:8 15.96 758 76.03 3e-52 mol:protein length:758 PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A
blastp_pdb 3lw5_A 1 113 + 113 Gaps:8 16.40 738 76.03 3e-52 mol:protein length:738 Photosystem I P700 chlorophyll a apoprotein A
blastp_pdb 2o01_A 1 113 + 113 Gaps:8 16.05 754 76.03 3e-52 mol:protein length:754 Photosystem I P700 chlorophyll a apoprotein A
blastp_pdb 3pcq_A 1 113 + 113 Gaps:9 15.89 755 64.17 7e-42 mol:protein length:755 Photosystem I P700 chlorophyll a apoprotein A
blastp_pdb 1jb0_A 1 113 + 113 Gaps:9 15.89 755 64.17 7e-42 mol:protein length:755 PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A
blastp_pdb 2wsf_B 26 113 + 88 Gaps:9 12.94 734 33.68 1e-07 mol:protein length:734 PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A
blastp_pdb 2wse_B 26 113 + 88 Gaps:9 12.94 734 33.68 1e-07 mol:protein length:734 PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A
blastp_pdb 2wsc_B 26 113 + 88 Gaps:9 12.94 734 33.68 1e-07 mol:protein length:734 PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A
blastp_uniprot_sprot sp|Q09X17|PSAA_MORIN 1 113 + 113 Gaps:8 16.13 750 78.51 9e-54 Photosystem I P700 chlorophyll a apoprotein A1 OS Morus indica GN psaA PE 3 SV 1
blastp_uniprot_sprot sp|Q68S06|PSAA_PANGI 19 113 + 95 none 12.67 750 95.79 1e-53 Photosystem I P700 chlorophyll a apoprotein A1 OS Panax ginseng GN psaA PE 3 SV 1
blastp_uniprot_sprot sp|Q70Y03|PSAA_AMBTC 19 113 + 95 none 12.67 750 94.74 1e-53 Photosystem I P700 chlorophyll a apoprotein A1 OS Amborella trichopoda GN psaA PE 2 SV 1
blastp_uniprot_sprot sp|Q09G46|PSAA_PLAOC 19 113 + 95 none 12.67 750 94.74 1e-53 Photosystem I P700 chlorophyll a apoprotein A1 OS Platanus occidentalis GN psaA PE 3 SV 1
blastp_uniprot_sprot sp|Q0G9L9|PSAA_LIRTU 19 113 + 95 none 12.67 750 93.68 2e-53 Photosystem I P700 chlorophyll a apoprotein A1 OS Liriodendron tulipifera GN psaA PE 3 SV 1
blastp_uniprot_sprot sp|Q9MUJ9|PSAA_DRIWI 19 113 + 95 none 13.25 717 92.63 3e-53 Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS Drimys winteri GN psaA PE 3 SV 1
blastp_uniprot_sprot sp|Q06GZ7|PSAA_DRIGR 19 113 + 95 none 12.67 750 92.63 4e-53 Photosystem I P700 chlorophyll a apoprotein A1 OS Drimys granadensis GN psaA PE 3 SV 1
blastp_uniprot_sprot sp|Q9MTN8|PSAA_OENEH 1 113 + 113 Gaps:8 16.13 750 77.69 4e-53 Photosystem I P700 chlorophyll a apoprotein A1 OS Oenothera elata subsp. hookeri GN psaA PE 3 SV 2
blastp_uniprot_sprot sp|Q8S8X4|PSAA_ATRBE 19 113 + 95 none 12.67 750 94.74 4e-53 Photosystem I P700 chlorophyll a apoprotein A1 OS Atropa belladonna GN psaA PE 3 SV 1
blastp_uniprot_sprot sp|Q06RD1|PSAA_JASNU 19 113 + 95 none 12.67 750 94.74 4e-53 Photosystem I P700 chlorophyll a apoprotein A1 OS Jasminum nudiflorum GN psaA PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 19 113 95 G3DSA:1.20.1130.10 "MetaCyc:PWY-101","MetaCyc:PWY-6785" none IPR001280
Phobius 111 114 4 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 19 112 94 PTHR30128:SF6 none none none
Phobius 19 36 18 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 36 36 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 4 18 15 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 18 113 96 SSF81558 "MetaCyc:PWY-101","MetaCyc:PWY-6785" none IPR001280
Pfam 19 113 95 PF00223 "MetaCyc:PWY-101","MetaCyc:PWY-6785" Photosystem I psaA/psaB protein IPR001280
Phobius 91 110 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 37 90 54 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 19 112 94 PTHR30128 none none none

1 Localization

Analysis Start End Length
SignalP_EUK 1 17 16

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting