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Tools

Tools are in free access Public access or restricted access Registered access

They run on the web, unix or both.

Tools in restricted access can use unpublished data.


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LUMPY is a framework for the discovery of structural variants (SV) that naturally integrates multiple SV signals jointly across multiple samples.
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A graphical viewer for pairwise sequence alignments.
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LASTZ is a program for aligning DNA sequences, a pairwise aligner. Originally designed to handle sequences the size of human chromosomes and from different species, it is also useful for sequences produced by NGS sequencing technologies such as Roche 454.
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Update: 02 Dec 2011
Creation date: 31 May 2011