Protein : Qrob_P0742030.2 Q. robur
Protein Identifier  ? Qrob_P0742030.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K05609 - ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12] Code Enzyme  EC:3.4.19.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 237  
Kegg Orthology  K05609
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0004843 ubiquitin-specific protease activity Catalysis of the thiol-dependent hydrolysis of a peptide bond formed by the C-terminal glycine of ubiquitin.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa010780mg 1 234 + 234 none 99.15 236 85.90 2e-149 hypothetical protein
blastp_kegg lcl|pmum:103337040 1 234 + 234 none 99.15 236 85.04 5e-148 ubiquitin carboxyl-terminal hydrolase isozyme L3
blastp_kegg lcl|gmx:100527718 1 233 + 233 none 98.73 236 84.55 3e-147 uncharacterized LOC100527718
blastp_kegg lcl|gmx:100816564 1 233 + 233 none 98.73 236 83.69 2e-145 ubiquitin carboxyl-terminal hydrolase isozyme L3-like
blastp_kegg lcl|pxb:103926612 1 236 + 236 none 100.00 236 82.20 2e-145 ubiquitin carboxyl-terminal hydrolase isozyme L3-like
blastp_kegg lcl|pxb:103958582 1 236 + 236 Gaps:1 100.00 235 83.40 3e-144 ubiquitin carboxyl-terminal hydrolase isozyme L3-like
blastp_kegg lcl|pxb:103958573 1 236 + 236 Gaps:1 100.00 235 83.40 3e-144 ubiquitin carboxyl-terminal hydrolase isozyme L3-like
blastp_kegg lcl|pvu:PHAVU_009G190600g 1 232 + 232 none 98.31 236 81.90 6e-143 hypothetical protein
blastp_kegg lcl|mdm:103431461 1 236 + 236 none 100.00 236 80.93 1e-141 ubiquitin carboxyl-terminal hydrolase isozyme L3-like
blastp_kegg lcl|rcu:RCOM_0191600 1 235 + 235 none 99.58 236 80.85 3e-141 Ubiquitin carboxyl-terminal hydrolase isozyme L3 putative (EC:3.4.19.12)
blastp_pdb 1xd3_C 10 229 + 220 Gaps:8 98.26 230 49.56 2e-70 mol:protein length:230 Ubiquitin Carboxyl-terminal esterase L3
blastp_pdb 1xd3_A 10 229 + 220 Gaps:8 98.26 230 49.56 2e-70 mol:protein length:230 Ubiquitin Carboxyl-terminal esterase L3
blastp_pdb 1uch_A 10 229 + 220 Gaps:8 98.26 230 49.56 2e-70 mol:protein length:230 UBIQUITIN C-TERMINAL HYDROLASE UCH-L3
blastp_pdb 3ifw_A 15 230 + 216 Gaps:3 95.18 228 44.24 4e-58 mol:protein length:228 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3kw5_A 15 230 + 216 Gaps:3 95.18 228 44.24 3e-57 mol:protein length:228 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 2etl_B 15 230 + 216 Gaps:3 95.18 228 44.24 3e-57 mol:protein length:228 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 2etl_A 15 230 + 216 Gaps:3 95.18 228 44.24 3e-57 mol:protein length:228 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3kvf_A 15 230 + 216 Gaps:3 95.18 228 43.78 8e-57 mol:protein length:228 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3irt_B 15 230 + 216 Gaps:3 95.18 228 43.78 8e-57 mol:protein length:228 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3irt_A 15 230 + 216 Gaps:3 95.18 228 43.78 8e-57 mol:protein length:228 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_uniprot_sprot sp|Q2TBG8|UCHL3_BOVIN 10 229 + 220 Gaps:8 98.26 230 50.00 2e-70 Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS Bos taurus GN UCHL3 PE 2 SV 1
blastp_uniprot_sprot sp|P15374|UCHL3_HUMAN 10 229 + 220 Gaps:8 98.26 230 49.56 8e-70 Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS Homo sapiens GN UCHL3 PE 1 SV 1
blastp_uniprot_sprot sp|Q06AB3|UCHL3_PIG 10 229 + 220 Gaps:8 98.26 230 49.56 2e-69 Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS Sus scrofa GN UCHL3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9JKB1|UCHL3_MOUSE 10 229 + 220 Gaps:8 98.26 230 48.67 1e-68 Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS Mus musculus GN Uchl3 PE 1 SV 2
blastp_uniprot_sprot sp|Q91Y78|UCHL3_RAT 10 229 + 220 Gaps:8 98.26 230 48.67 3e-68 Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS Rattus norvegicus GN Uchl3 PE 1 SV 1
blastp_uniprot_sprot sp|P58321|UCHL4_MOUSE 10 229 + 220 Gaps:11 98.28 233 47.16 4e-65 Ubiquitin carboxyl-terminal hydrolase isozyme L4 OS Mus musculus GN Uchl4 PE 2 SV 1
blastp_uniprot_sprot sp|Q54T48|UCHL_DICDI 9 228 + 220 Gaps:8 88.63 255 42.92 5e-61 Probable ubiquitin carboxyl-terminal hydrolase OS Dictyostelium discoideum GN uch1 PE 3 SV 1
blastp_uniprot_sprot sp|Q00981|UCHL1_RAT 15 230 + 216 Gaps:3 97.31 223 44.70 9e-58 Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS Rattus norvegicus GN Uchl1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9R0P9|UCHL1_MOUSE 15 230 + 216 Gaps:3 97.31 223 44.70 9e-58 Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS Mus musculus GN Uchl1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6SEG5|UCHL1_PIG 15 230 + 216 Gaps:3 97.31 223 44.70 2e-57 Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS Sus scrofa GN UCHL1 PE 2 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 11 230 220 SSF54001 none none none
Gene3D 10 230 221 G3DSA:3.40.532.10 none none IPR001578
PANTHER 9 230 222 PTHR10589 none none IPR001578
PRINTS 93 110 18 PR00707 none Ubiquitin C-terminal hydrolase (C12) family signature IPR001578
PRINTS 165 176 12 PR00707 none Ubiquitin C-terminal hydrolase (C12) family signature IPR001578
PRINTS 181 191 11 PR00707 none Ubiquitin C-terminal hydrolase (C12) family signature IPR001578
PRINTS 53 65 13 PR00707 none Ubiquitin C-terminal hydrolase (C12) family signature IPR001578
PRINTS 15 32 18 PR00707 none Ubiquitin C-terminal hydrolase (C12) family signature IPR001578
Pfam 12 216 205 PF01088 none Ubiquitin carboxyl-terminal hydrolase, family 1 IPR001578

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting