Protein : Qrob_P0706350.2 Q. robur
Protein Identifier  ? Qrob_P0706350.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR30071 - HEME EXPORTER PROTEIN C Gene Prediction Quality  validated
Protein length 

Sequence

Length: 219  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0020037 heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
GO:0017004 cytochrome complex assembly The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.
GO:0015232 heme transporter activity Enables the directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of or within a cell, or between cells.
GO:0015886 heme transport The directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:13630203 32 218 + 187 none 74.80 250 96.26 4e-122 ccmC C3258_p31 ccmC
blastp_kegg lcl|ath:ArthMp079 32 211 + 180 none 70.31 256 95.56 2e-116 ccb256 cytochrome c biogenesis orf256
blastp_kegg lcl|ath:AT2G07771 32 211 + 180 none 70.31 256 95.56 2e-116 Cytochrome C assembly protein
blastp_kegg lcl|vvi:7498513 32 218 + 187 none 74.80 250 91.44 2e-114 ccmC ViviM_p055 cytochrome c biogenesis C
blastp_kegg lcl|rcu:RCOM_Mp19 32 200 + 169 none 72.84 232 97.63 4e-110 ccmC cytochrome c biogenesis C
blastp_kegg lcl|gmx:15308539 32 213 + 182 none 73.98 246 91.76 6e-110 ccmC GlmaxMp01 cytochrome c biogenesis C
blastp_kegg lcl|cam:101509725 32 203 + 172 none 73.19 235 94.19 2e-107 putative cytochrome c biosynthesis ccmC-like mitochondrial protein-like
blastp_kegg lcl|cam:101490171 32 203 + 172 none 73.19 235 94.19 2e-107 putative cytochrome c biosynthesis ccmC-like mitochondrial protein-like
blastp_kegg lcl|cam:101491144 32 203 + 172 none 73.19 235 93.02 1e-104 putative cytochrome c biosynthesis ccmC-like mitochondrial protein-like
blastp_kegg lcl|csv:11123883 32 200 + 169 none 68.42 247 93.49 7e-104 ccmC CusaM_p24 cytochrome c biogenesis C
blastp_uniprot_sprot sp|P92527|CCMC_ARATH 32 200 + 169 none 72.84 232 85.21 2e-92 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS Arabidopsis thaliana GN CCMC PE 2 SV 4
blastp_uniprot_sprot sp|P38453|CCMC_MARPO 32 189 + 158 none 69.30 228 68.35 9e-66 Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS Marchantia polymorpha GN CCMC PE 3 SV 1
blastp_uniprot_sprot sp|P30962|CCMC_BRADU 32 164 + 133 Gaps:7 53.23 263 43.57 7e-27 Heme exporter protein C OS Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN cycZ PE 3 SV 1
blastp_uniprot_sprot sp|P45034|CCMC_HAEIN 64 164 + 101 Gaps:7 43.90 246 45.37 1e-21 Heme exporter protein C OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN ccmC PE 3 SV 1
blastp_uniprot_sprot sp|P0ABM4|CCMC_SHIFL 32 203 + 172 Gaps:9 72.24 245 33.33 1e-19 Heme exporter protein C OS Shigella flexneri GN ccmC PE 3 SV 1
blastp_uniprot_sprot sp|P0ABM1|CCMC_ECOLI 32 203 + 172 Gaps:9 72.24 245 33.33 1e-19 Heme exporter protein C OS Escherichia coli (strain K12) GN ccmC PE 1 SV 1
blastp_uniprot_sprot sp|P0ABM2|CCMC_ECOL6 32 203 + 172 Gaps:9 72.24 245 33.33 1e-19 Heme exporter protein C OS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN ccmC PE 3 SV 1
blastp_uniprot_sprot sp|P0ABM3|CCMC_ECO57 32 203 + 172 Gaps:9 72.24 245 33.33 1e-19 Heme exporter protein C OS Escherichia coli O157:H7 GN ccmC PE 3 SV 1
blastp_uniprot_sprot sp|Q9I3N5|CCMC_PSEAE 35 164 + 130 Gaps:7 54.37 252 32.85 7e-18 Heme exporter protein C OS Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN ccmC PE 3 SV 1
blastp_uniprot_sprot sp|P52220|CCMC_PARDP 32 151 + 120 Gaps:7 52.70 241 31.50 4e-13 Heme exporter protein C OS Paracoccus denitrificans (strain Pd 1222) GN ccmC PE 3 SV 2
rpsblast_cdd gnl|CDD|162244 32 186 + 155 Gaps:7 88.04 184 51.23 4e-55 TIGR01191 ccmC heme exporter protein CcmC. This model describes the cyt c biogenesis protein encoded by ccmC in bacteria. It must be noted an arabidopsis a tritcum and a piscum plant proteins were recognizable in the clade. Quite likely they are of organellar origin. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes ccmA B C D E F G and H. The posttranslational pathway includes the transport of heme moiety the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter ccmC and D participate in the heme transfer to ccmE which function as a periplasmic heme chaperone. The presence of ccmF G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
rpsblast_cdd gnl|CDD|144973 32 143 + 112 Gaps:4 54.98 211 25.86 3e-13 pfam01578 Cytochrom_C_asm Cytochrome C assembly protein. This family consists of various proteins involved in cytochrome c assembly from mitochondria and bacteria CycK from Rhizobium CcmC from E. coli and Paracoccus denitrificans and orf240 from wheat mitochondria. The members of this family are probably integral membrane proteins with six predicted transmembrane helices. It has been proposed that members of this family comprise a membrane component of an ABC (ATP binding cassette) transporter complex. It is also proposed that this transporter is necessary for transport of some component needed for cytochrome c assembly. One member CycK contains a putative heme-binding motif orf240 also contains a putative heme-binding motif and is a proposed ABC transporter with c-type heme as its proposed substrate. However it seems unlikely that all members of this family transport heme nor c-type apocytochromes because CcmC in the putative CcmABC transporter transports neither.
rpsblast_cdd gnl|CDD|31098 32 171 + 140 Gaps:8 52.67 281 30.41 1e-11 COG0755 CcmC ABC-type transport system involved in cytochrome c biogenesis permease component [Posttranslational modification protein turnover chaperones].

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 50 86 37 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 42 140 99 PF01578 none Cytochrome C assembly protein IPR002541
Phobius 33 49 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 6 26 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Coils 10 11 2 Coil none none none
PANTHER 32 182 151 PTHR30071 none none none
TIGRFAM 31 186 156 TIGR01191 none ccmC: heme exporter protein CcmC IPR003557
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 108 218 111 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 115 141 27 PR01386 none Cytochrome c-type biogenesis protein CcmC signature IPR003557
PRINTS 162 186 25 PR01386 none Cytochrome c-type biogenesis protein CcmC signature IPR003557
PRINTS 65 85 21 PR01386 none Cytochrome c-type biogenesis protein CcmC signature IPR003557
PRINTS 27 47 21 PR01386 none Cytochrome c-type biogenesis protein CcmC signature IPR003557
PRINTS 86 106 21 PR01386 none Cytochrome c-type biogenesis protein CcmC signature IPR003557
PANTHER 32 182 151 PTHR30071:SF0 none none none
Phobius 27 32 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 87 107 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

3 Localization

Analysis Start End Length
TMHMM 4 26 22
TMHMM 86 108 22
TMHMM 33 55 22

0 Qtllist

0 Targeting