Protein : Qrob_P0685350.2 Q. robur

Protein Identifier  ? Qrob_P0685350.2 Organism . Name  Quercus robur
Protein Description  (M=6) PTHR31561:SF3 - 3-KETOACYL-COA SYNTHASE 11 (PTHR31561:SF3) Alias (in v1)  Qrob_P0524830.1
Code Enzyme  EC:2.3.1.199 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 508  
Kegg Orthology  K15397

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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0006633 fatty acid biosynthetic process The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
GO:0008610 lipid biosynthetic process The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103966995 1 507 + 507 Gaps:1 100.00 506 87.55 0.0 3-ketoacyl-CoA synthase 4-like
blastp_kegg lcl|mdm:103440401 1 506 + 506 Gaps:1 99.80 506 87.52 0.0 3-ketoacyl-CoA synthase 4-like
blastp_kegg lcl|pper:PRUPE_ppa004500mg 1 506 + 506 Gaps:1 99.80 506 87.33 0.0 hypothetical protein
blastp_kegg lcl|pmum:103335658 1 506 + 506 Gaps:1 99.80 506 87.33 0.0 3-ketoacyl-CoA synthase 4-like
blastp_kegg lcl|vvi:100853861 11 507 + 497 none 98.61 504 87.53 0.0 3-ketoacyl-CoA synthase 4-like
blastp_kegg lcl|fve:101298755 9 506 + 498 none 97.84 509 86.14 0.0 3-ketoacyl-CoA synthase 4-like
blastp_kegg lcl|tcc:TCM_006881 1 505 + 505 none 99.61 507 85.15 0.0 3-ketoacyl-CoA synthase 4
blastp_kegg lcl|pop:POPTR_0009s11940g 4 506 + 503 none 98.63 510 85.49 0.0 POPTRDRAFT_804204 hypothetical protein
blastp_kegg lcl|pop:POPTR_0004s16290g 4 506 + 503 none 98.63 510 85.69 0.0 POPTRDRAFT_800773 hypothetical protein
blastp_kegg lcl|pmum:103320850 3 507 + 505 none 97.49 518 84.95 0.0 3-ketoacyl-CoA synthase 4
blastp_pdb 3ale_D 196 486 + 291 Gaps:36 65.14 416 24.72 3e-09 mol:protein length:416 Os07g0271500 protein
blastp_pdb 3ale_C 196 486 + 291 Gaps:36 65.14 416 24.72 3e-09 mol:protein length:416 Os07g0271500 protein
blastp_pdb 3ale_B 196 486 + 291 Gaps:36 65.14 416 24.72 3e-09 mol:protein length:416 Os07g0271500 protein
blastp_pdb 3ale_A 196 486 + 291 Gaps:36 65.14 416 24.72 3e-09 mol:protein length:416 Os07g0271500 protein
blastp_pdb 3oit_B 196 482 + 287 Gaps:36 68.99 387 24.72 7e-09 mol:protein length:387 Os07g0271500 protein
blastp_pdb 3oit_A 196 482 + 287 Gaps:36 68.99 387 24.72 7e-09 mol:protein length:387 Os07g0271500 protein
blastp_pdb 1i88_B 225 472 + 248 Gaps:41 57.84 389 28.00 1e-08 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_pdb 1i88_A 225 472 + 248 Gaps:41 57.84 389 28.00 1e-08 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_pdb 1i86_A 225 472 + 248 Gaps:41 57.84 389 27.56 1e-08 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_pdb 1i89_B 225 472 + 248 Gaps:41 57.84 389 27.56 2e-08 mol:protein length:389 CHALCONE SYNTHASE 2
blastp_uniprot_sprot sp|Q9LN49|KCS4_ARATH 13 505 + 493 none 95.54 516 83.98 0.0 3-ketoacyl-CoA synthase 4 OS Arabidopsis thaliana GN KCS4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIX1|KCS9_ARATH 2 505 + 504 Gaps:5 99.02 512 76.92 0.0 3-ketoacyl-CoA synthase 9 OS Arabidopsis thaliana GN KCS9 PE 2 SV 1
blastp_uniprot_sprot sp|O65677|KCS2_ARATH 31 505 + 475 Gaps:6 96.71 487 74.95 0.0 Probable 3-ketoacyl-CoA synthase 2 OS Arabidopsis thaliana GN KCS2 PE 2 SV 1
blastp_uniprot_sprot sp|O48780|KCS11_ARATH 18 505 + 488 Gaps:1 96.07 509 65.64 0.0 3-ketoacyl-CoA synthase 11 OS Arabidopsis thaliana GN KCS11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XF43|KCS6_ARATH 20 505 + 486 none 97.79 497 63.37 0.0 3-ketoacyl-CoA synthase 6 OS Arabidopsis thaliana GN CUT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C6L5|KCS5_ARATH 20 505 + 486 none 98.78 492 60.91 0.0 3-ketoacyl-CoA synthase 5 OS Arabidopsis thaliana GN KCS5 PE 1 SV 1
blastp_uniprot_sprot sp|Q5XEP9|KCS17_ARATH 14 505 + 492 Gaps:11 94.89 528 62.67 0.0 3-ketoacyl-CoA synthase 17 OS Arabidopsis thaliana GN KCS17 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SYZ0|KCS16_ARATH 29 505 + 477 Gaps:6 97.97 493 62.53 0.0 3-ketoacyl-CoA synthase 16 OS Arabidopsis thaliana GN KCS16 PE 2 SV 1
blastp_uniprot_sprot sp|Q38860|KCS18_ARATH 24 505 + 482 Gaps:14 96.84 506 63.06 0.0 3-ketoacyl-CoA synthase 18 OS Arabidopsis thaliana GN FAE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FG87|KCS19_ARATH 26 505 + 480 Gaps:7 92.06 529 63.86 0.0 3-ketoacyl-CoA synthase 19 OS Arabidopsis thaliana GN KCS19 PE 2 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 95 384 290 PF08392 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" FAE1/Type III polyketide synthase-like protein IPR013601
Gene3D 311 484 174 G3DSA:3.40.47.10 none none IPR016038
Gene3D 95 300 206 G3DSA:3.40.47.10 none none IPR016038
PANTHER 1 506 506 PTHR31561 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094";signature_desc=FAMILY NOT NAMED none IPR012392
Phobius 36 57 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 78 97 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 401 481 81 PF08541 "KEGG:00061+2.3.1.180","MetaCyc:PWY-4381","UniPathway:UPA00094" 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal IPR013747
Phobius 58 77 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 98 507 410 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 506 506 PTHR31561:SF3 none none none
SUPERFAMILY 312 481 170 SSF53901 none none IPR016039
PIRSF 22 507 486 PIRSF036417 "KEGG:00062+2.3.1.199","MetaCyc:PWY-5080","MetaCyc:PWY-5972","MetaCyc:PWY-6433","MetaCyc:PWY-6598","MetaCyc:PWY-7036","MetaCyc:PWY-7601","MetaCyc:PWY-7602","MetaCyc:PWY-7619","UniPathway:UPA00094" none IPR012392
SUPERFAMILY 89 304 216 SSF53901 none none IPR016039
Phobius 1 35 35 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
TMHMM 34 56 22
TMHMM 76 98 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting