Protein : Qrob_P0685050.2 Q. robur
Protein Identifier  ? Qrob_P0685050.2 Organism . Name  Quercus robur
Score  84.2 Score Type  egn
Protein Description  (M=1) K14759 - isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase [EC:5.4.4.2 2.2.1.9 4.2.99.20 4.2.1.113] Code Enzyme  EC:2.2.1.9, EC:4.2.99.20, EC:4.2.1.113
Gene Prediction Quality  validated Protein length 

Sequence

Length: 642  
Kegg Orthology  K14759
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030976 thiamine pyrophosphate binding Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases.
GO:0009063 cellular amino acid catabolic process The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa016512mg 2 625 + 624 Gaps:31 35.92 1651 67.62 0.0 hypothetical protein
blastp_kegg lcl|pxb:103946661 2 625 + 624 Gaps:31 34.60 1714 67.79 0.0 protein PHYLLO chloroplastic
blastp_kegg lcl|vvi:100241089 3 621 + 619 Gaps:31 36.43 1614 69.05 0.0 protein PHYLLO chloroplastic-like
blastp_kegg lcl|pmum:103342087 2 623 + 622 Gaps:31 34.91 1693 67.17 0.0 protein PHYLLO chloroplastic
blastp_kegg lcl|tcc:TCM_011392 3 629 + 627 Gaps:32 33.73 1770 67.00 0.0 Menaquinone biosynthesis protein putative isoform 1
blastp_kegg lcl|cmo:103489211 3 630 + 628 Gaps:33 34.56 1733 65.44 0.0 protein PHYLLO chloroplastic
blastp_kegg lcl|rcu:RCOM_1465190 3 625 + 623 Gaps:33 35.14 1679 67.97 0.0 menaquinone biosynthesis protein putative (EC:3.1.1.1)
blastp_kegg lcl|csv:101217012 3 630 + 628 Gaps:33 33.39 1794 64.77 0.0 protein PHYLLO chloroplastic-like
blastp_kegg lcl|csv:101224530 3 630 + 628 Gaps:33 33.39 1794 64.77 0.0 protein PHYLLO chloroplastic-like
blastp_kegg lcl|cit:102608540 3 626 + 624 Gaps:34 33.96 1749 65.99 0.0 protein PHYLLO chloroplastic-like
blastp_pdb 1tkk_H 185 518 + 334 Gaps:41 84.97 366 28.94 2e-16 mol:protein length:366 similar to chloromuconate cycloisomerase
blastp_pdb 1tkk_G 185 518 + 334 Gaps:41 84.97 366 28.94 2e-16 mol:protein length:366 similar to chloromuconate cycloisomerase
blastp_pdb 1tkk_F 185 518 + 334 Gaps:41 84.97 366 28.94 2e-16 mol:protein length:366 similar to chloromuconate cycloisomerase
blastp_pdb 1tkk_E 185 518 + 334 Gaps:41 84.97 366 28.94 2e-16 mol:protein length:366 similar to chloromuconate cycloisomerase
blastp_pdb 1tkk_D 185 518 + 334 Gaps:41 84.97 366 28.94 2e-16 mol:protein length:366 similar to chloromuconate cycloisomerase
blastp_pdb 1tkk_C 185 518 + 334 Gaps:41 84.97 366 28.94 2e-16 mol:protein length:366 similar to chloromuconate cycloisomerase
blastp_pdb 1tkk_B 185 518 + 334 Gaps:41 84.97 366 28.94 2e-16 mol:protein length:366 similar to chloromuconate cycloisomerase
blastp_pdb 1tkk_A 185 518 + 334 Gaps:41 84.97 366 28.94 2e-16 mol:protein length:366 similar to chloromuconate cycloisomerase
blastp_pdb 1jpm_D 185 518 + 334 Gaps:41 84.97 366 28.94 2e-16 mol:protein length:366 L-Ala-D/L-Glu Epimerase
blastp_pdb 1jpm_C 185 518 + 334 Gaps:41 84.97 366 28.94 2e-16 mol:protein length:366 L-Ala-D/L-Glu Epimerase
blastp_uniprot_sprot sp|Q15KI9|PHYLO_ARATH 3 622 + 620 Gaps:34 34.17 1715 57.68 0.0 Protein PHYLLO chloroplastic OS Arabidopsis thaliana GN PHYLLO PE 2 SV 2
blastp_uniprot_sprot sp|O34508|AEEP_BACSU 185 518 + 334 Gaps:41 84.97 366 28.94 6e-16 L-Ala-D/L-Glu epimerase OS Bacillus subtilis (strain 168) GN ykfB PE 1 SV 1
blastp_uniprot_sprot sp|A1BI74|MEND_CHLPD 3 122 + 120 Gaps:4 19.76 587 40.52 7e-16 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase OS Chlorobium phaeobacteroides (strain DSM 266) GN menD PE 3 SV 1
blastp_uniprot_sprot sp|Q3B612|MEND_PELLD 2 134 + 133 Gaps:4 22.13 583 35.66 1e-15 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase OS Pelodictyon luteolum (strain DSM 273) GN menD PE 3 SV 1
blastp_uniprot_sprot sp|Q9CLV7|MENC_PASMU 216 511 + 296 Gaps:56 75.96 337 32.03 7e-15 o-succinylbenzoate synthase OS Pasteurella multocida (strain Pm70) GN menC PE 3 SV 1
blastp_uniprot_sprot sp|B4S4J4|MEND_PROA2 3 122 + 120 Gaps:4 20.07 578 37.07 8e-15 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase OS Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN menD PE 3 SV 1
blastp_uniprot_sprot sp|B3QL00|MEND_CHLP8 6 130 + 125 Gaps:4 20.75 583 38.02 2e-14 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase OS Chlorobaculum parvum (strain NCIB 8327) GN menD PE 3 SV 1
blastp_uniprot_sprot sp|Q5E484|MENC_VIBF1 216 519 + 304 Gaps:58 79.01 324 29.69 2e-14 o-succinylbenzoate synthase OS Vibrio fischeri (strain ATCC 700601 / ES114) GN menC PE 3 SV 1
blastp_uniprot_sprot sp|B5FFK8|MENC_VIBFM 216 519 + 304 Gaps:58 79.01 324 29.30 3e-14 o-succinylbenzoate synthase OS Vibrio fischeri (strain MJ11) GN menC PE 3 SV 1
blastp_uniprot_sprot sp|Q2JK10|MEND_SYNJB 3 120 + 118 Gaps:6 19.41 608 40.68 4e-14 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase OS Synechococcus sp. (strain JA-2-3B'a(2-13)) GN menD PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 186 355 170 G3DSA:3.30.390.10 none none IPR029017
ProSitePatterns 394 425 32 PS00909 none Mandelate racemase / muconate lactonizing enzyme family signature 2. IPR018110
Pfam 381 446 66 PF01188 none Mandelate racemase / muconate lactonizing enzyme, C-terminal domain IPR013342
SUPERFAMILY 342 562 221 SSF51604 none none IPR029065
PANTHER 2 179 178 PTHR18968 none none none
SMART 346 442 97 SM00922 none Mandelate racemase / muconate lactonizing enzyme, C-terminal domain IPR013342
PANTHER 2 179 178 PTHR18968:SF114 none none none
SUPERFAMILY 2 126 125 SSF52518 none none IPR029061
Gene3D 2 116 115 G3DSA:3.40.50.970 none none IPR029061
Gene3D 356 562 207 G3DSA:3.20.20.120 none none IPR029065
Pfam 2 95 94 PF02775 none Thiamine pyrophosphate enzyme, C-terminal TPP binding domain IPR011766
SUPERFAMILY 185 316 132 SSF54826 none none IPR029017

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting