Protein : Qrob_P0668610.2 Q. robur
Protein Identifier  ? Qrob_P0668610.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) KOG0628//KOG0629//KOG1383 - Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]. // Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]. // Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 505  
Kegg Orthology  K01592
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0016831 carboxy-lyase activity Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).
GO:0006520 cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_007889 1 499 + 499 Gaps:5 99.80 495 80.97 0.0 Tyrosine/DOPA decarboxylase
blastp_kegg lcl|cic:CICLE_v10014992mg 1 501 + 501 Gaps:5 99.40 499 76.41 0.0 hypothetical protein
blastp_kegg lcl|cit:102607021 1 501 + 501 Gaps:5 99.40 499 76.41 0.0 aromatic-L-amino-acid decarboxylase-like
blastp_kegg lcl|pper:PRUPE_ppa026170mg 1 500 + 500 Gaps:7 99.21 509 75.84 0.0 hypothetical protein
blastp_kegg lcl|pmum:103329555 1 500 + 500 Gaps:7 99.21 509 76.04 0.0 aromatic-L-amino-acid decarboxylase-like
blastp_kegg lcl|sly:101251901 1 500 + 500 Gaps:6 99.21 504 74.80 0.0 aromatic-L-amino-acid decarboxylase-like
blastp_kegg lcl|sot:102600956 1 500 + 500 Gaps:6 99.21 504 73.20 0.0 aromatic-L-amino-acid decarboxylase-like
blastp_kegg lcl|sly:101263431 1 502 + 502 Gaps:6 99.60 504 71.91 0.0 aromatic-L-amino-acid decarboxylase-like
blastp_kegg lcl|sot:102592946 55 500 + 446 Gaps:1 99.11 449 75.06 0.0 aromatic-L-amino-acid decarboxylase-like
blastp_kegg lcl|vvi:100261466 1 504 + 504 Gaps:3 99.60 503 65.07 0.0 aromatic-L-amino-acid decarboxylase-like
blastp_pdb 3rch_B 21 501 + 481 Gaps:22 99.38 480 44.44 6e-143 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rch_A 21 501 + 481 Gaps:22 99.38 480 44.44 6e-143 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbl_B 21 501 + 481 Gaps:22 99.38 480 44.44 6e-143 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbl_A 21 501 + 481 Gaps:22 99.38 480 44.44 6e-143 mol:protein length:480 aromatic L-amino acid decarboxylase
blastp_pdb 3rbf_B 21 501 + 481 Gaps:22 99.38 480 44.44 6e-143 mol:protein length:480 Aromatic-L-amino-acid decarboxylase
blastp_pdb 3rbf_A 21 501 + 481 Gaps:22 99.38 480 44.44 6e-143 mol:protein length:480 Aromatic-L-amino-acid decarboxylase
blastp_pdb 1js6_B 21 492 + 472 Gaps:22 96.30 486 44.87 5e-138 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js6_A 21 492 + 472 Gaps:22 96.30 486 44.87 5e-138 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js3_B 21 492 + 472 Gaps:22 96.30 486 44.87 5e-138 mol:protein length:486 DOPA decarboxylase
blastp_pdb 1js3_A 21 492 + 472 Gaps:22 96.30 486 44.87 5e-138 mol:protein length:486 DOPA decarboxylase
blastp_uniprot_sprot sp|P17770|DDC_CATRO 1 500 + 500 Gaps:4 99.60 500 68.27 0.0 Aromatic-L-amino-acid decarboxylase OS Catharanthus roseus GN TDC PE 2 SV 1
blastp_uniprot_sprot sp|P54769|TYDC2_PAPSO 1 499 + 499 Gaps:26 98.12 531 58.54 0.0 Tyrosine/DOPA decarboxylase 2 OS Papaver somniferum GN TYDC2 PE 2 SV 1
blastp_uniprot_sprot sp|P54770|TYDC3_PAPSO 1 499 + 499 Gaps:26 98.12 533 57.36 0.0 Tyrosine/DOPA decarboxylase 3 OS Papaver somniferum GN TYDC3 PE 2 SV 2
blastp_uniprot_sprot sp|Q06087|TYDC3_PETCR 1 499 + 499 Gaps:5 97.29 516 59.56 0.0 Tyrosine decarboxylase 3 OS Petroselinum crispum GN TYRDC-3 PE 2 SV 1
blastp_uniprot_sprot sp|P54768|TYDC1_PAPSO 1 502 + 502 Gaps:15 99.03 518 57.31 0.0 Tyrosine/DOPA decarboxylase 1 OS Papaver somniferum GN TYDC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q06088|TYDC4_PETCR 1 499 + 499 Gaps:4 98.62 508 59.28 0.0 Tyrosine decarboxylase 4 OS Petroselinum crispum GN TYRDC-4 PE 2 SV 1
blastp_uniprot_sprot sp|Q06086|TYDC2_PETCR 1 499 + 499 Gaps:5 97.28 514 59.40 0.0 Tyrosine decarboxylase 2 OS Petroselinum crispum GN TYRDC-2 PE 2 SV 1
blastp_uniprot_sprot sp|P54771|TYDC5_PAPSO 1 504 + 504 Gaps:23 99.24 523 56.26 0.0 Tyrosine/DOPA decarboxylase 5 OS Papaver somniferum GN TYDC5 PE 2 SV 1
blastp_uniprot_sprot sp|Q7XHL3|TYDC1_ORYSJ 18 499 + 482 Gaps:2 96.58 497 53.54 0.0 Tyrosine decarboxylase 1 OS Oryza sativa subsp. japonica GN Os07g0437500 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RY79|TYDC1_ARATH 18 499 + 482 Gaps:2 97.96 490 55.62 0.0 Tyrosine decarboxylase 1 OS Arabidopsis thaliana GN ELI5 PE 2 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 22 496 475 SSF53383 none none IPR015424
Gene3D 21 101 81 G3DSA:1.20.1340.10 none none none
PANTHER 17 500 484 PTHR11999:SF70 none none none
PRINTS 368 383 16 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 133 152 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 411 430 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 26 45 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 93 112 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 114 132 19 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 158 178 21 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 49 66 18 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
PRINTS 67 86 20 PR00800 none Aromatic-L-amino-acid decarboxylase signature IPR010977
Gene3D 104 395 292 G3DSA:3.40.640.10 none none IPR015421
Pfam 55 429 375 PF00282 none Pyridoxal-dependent decarboxylase conserved domain IPR002129
PANTHER 17 500 484 PTHR11999 none none none
Gene3D 397 500 104 G3DSA:3.90.1150.10 none none IPR015422
ProSitePatterns 312 333 22 PS00392 none DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. IPR021115

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting