Protein : Qrob_P0666910.2 Q. robur
Protein Identifier  ? Qrob_P0666910.2 Organism . Name  Quercus robur
Score  52.4 Score Type  egn
Protein Description  (M=31) K01537 - Ca2+-transporting ATPase [EC:3.6.3.8] Code Enzyme  EC:3.6.3.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 854  
Kegg Orthology  K01537
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0005388 calcium-transporting ATPase activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans).
GO:0070588 calcium ion transmembrane transport A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.

49 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102629519 4 815 + 812 Gaps:4 79.30 1029 78.31 0.0 putative calcium-transporting ATPase 13 plasma membrane-type-like
blastp_kegg lcl|vvi:100264868 1 815 + 815 Gaps:6 80.53 1012 76.93 0.0 putative calcium-transporting ATPase 13 plasma membrane-type-like
blastp_kegg lcl|tcc:TCM_020728 4 815 + 812 Gaps:8 80.16 1018 78.43 0.0 Autoinhibited calcium ATPase
blastp_kegg lcl|rcu:RCOM_0910800 4 815 + 812 Gaps:8 80.36 1013 78.26 0.0 cation-transporting atpase plant putative (EC:3.6.3.8)
blastp_kegg lcl|vvi:100252717 4 815 + 812 Gaps:8 81.23 1007 75.55 0.0 putative calcium-transporting ATPase 13 plasma membrane-type-like
blastp_kegg lcl|tcc:TCM_020729 4 815 + 812 Gaps:6 80.16 1018 78.19 0.0 Autoinhibited calcium ATPase
blastp_kegg lcl|gmx:100793918 1 815 + 815 Gaps:21 80.66 1029 74.34 0.0 putative calcium-transporting ATPase 13 plasma membrane-type-like
blastp_kegg lcl|vvi:100242476 4 815 + 812 Gaps:7 80.22 1011 76.45 0.0 putative calcium-transporting ATPase 13 plasma membrane-type-like
blastp_kegg lcl|vvi:100259585 5 815 + 811 Gaps:13 80.12 1011 77.04 0.0 putative calcium-transporting ATPase 13 plasma membrane-type-like
blastp_kegg lcl|vvi:100257973 5 815 + 811 Gaps:11 80.12 1011 76.54 0.0 putative calcium-transporting ATPase 13 plasma membrane-type-like
blastp_pdb 3ixz_A 127 820 + 694 Gaps:117 69.73 1034 32.32 9e-84 mol:protein length:1034 Potassium-transporting ATPase alpha
blastp_pdb 2xzb_A 127 820 + 694 Gaps:117 69.73 1034 32.32 9e-84 mol:protein length:1034 POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1
blastp_pdb 3n2f_C 121 820 + 700 Gaps:108 73.19 992 31.40 4e-82 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n2f_A 121 820 + 700 Gaps:108 73.19 992 31.40 4e-82 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_C 121 820 + 700 Gaps:108 73.19 992 31.40 4e-82 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_A 121 820 + 700 Gaps:108 73.19 992 31.40 4e-82 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3kdp_C 121 820 + 700 Gaps:108 72.75 998 31.40 4e-82 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3kdp_A 121 820 + 700 Gaps:108 72.75 998 31.40 4e-82 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_C 121 820 + 700 Gaps:108 72.75 998 31.40 4e-82 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_A 121 820 + 700 Gaps:108 72.75 998 31.40 4e-82 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_uniprot_sprot sp|Q9LIK7|ACA13_ARATH 4 815 + 812 Gaps:18 79.45 1017 68.56 0.0 Putative calcium-transporting ATPase 13 plasma membrane-type OS Arabidopsis thaliana GN ACA13 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LY77|ACA12_ARATH 18 815 + 798 Gaps:24 77.83 1033 67.16 0.0 Calcium-transporting ATPase 12 plasma membrane-type OS Arabidopsis thaliana GN ACA12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZR1|ACA10_ARATH 66 815 + 750 Gaps:9 70.44 1069 55.78 0.0 Calcium-transporting ATPase 10 plasma membrane-type OS Arabidopsis thaliana GN ACA10 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LF79|ACA8_ARATH 62 815 + 754 Gaps:17 70.11 1074 56.44 0.0 Calcium-transporting ATPase 8 plasma membrane-type OS Arabidopsis thaliana GN ACA8 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LU41|ACA9_ARATH 66 815 + 750 Gaps:12 69.24 1086 55.05 0.0 Calcium-transporting ATPase 9 plasma membrane-type OS Arabidopsis thaliana GN ACA9 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M2L4|ACA11_ARATH 53 817 + 765 Gaps:29 72.78 1025 46.51 0.0 Putative calcium-transporting ATPase 11 plasma membrane-type OS Arabidopsis thaliana GN ACA11 PE 1 SV 1
blastp_uniprot_sprot sp|O22218|ACA4_ARATH 35 817 + 783 Gaps:28 74.47 1030 45.24 0.0 Calcium-transporting ATPase 4 plasma membrane-type OS Arabidopsis thaliana GN ACA4 PE 1 SV 1
blastp_uniprot_sprot sp|Q2RAS0|ACA5_ORYSJ 66 817 + 752 Gaps:30 72.57 1017 47.02 0.0 Probable calcium-transporting ATPase 5 plasma membrane-type OS Oryza sativa subsp. japonica GN Os11g0140400 PE 3 SV 1
blastp_uniprot_sprot sp|Q2QY12|ACA4_ORYSJ 26 817 + 792 Gaps:37 74.21 1039 45.91 0.0 Probable calcium-transporting ATPase 4 plasma membrane-type OS Oryza sativa subsp. japonica GN Os12g0136900 PE 3 SV 1
blastp_uniprot_sprot sp|Q37145|ACA1_ARATH 65 815 + 751 Gaps:26 72.65 1020 46.02 0.0 Calcium-transporting ATPase 1 chloroplastic OS Arabidopsis thaliana GN ACA1 PE 1 SV 3

44 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 173 192 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
TIGRFAM 374 453 80 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
TIGRFAM 176 348 173 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
TIGRFAM 709 816 108 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
Phobius 404 800 397 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 370 403 34 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 208 305 98 SSF81653 none none none
Phobius 1 19 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 98 141 44 G3DSA:2.70.150.10 none none IPR008250
Gene3D 198 306 109 G3DSA:2.70.150.10 none none IPR008250
Phobius 144 161 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 349 369 21 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 57 818 762 PTHR24093 none none none
Pfam 175 423 249 PF00122 none E1-E2 ATPase IPR008250
ProSitePatterns 433 439 7 PS00154 none E1-E2 ATPases phosphorylation site. IPR018303
SUPERFAMILY 437 642 206 SSF81660 none none IPR023299
SMART 90 161 72 SM00831 none Cation transporter/ATPase, N-terminus IPR004014
PANTHER 57 818 762 PTHR24093:SF254 none none none
Gene3D 421 636 216 G3DSA:3.40.1110.10 none none IPR023299
SUPERFAMILY 786 820 35 SSF81665 none none none
SUPERFAMILY 307 425 119 SSF81665 none none none
SUPERFAMILY 89 207 119 SSF81665 none none none
Phobius 820 853 34 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 429 449 21 SSF56784 none none IPR023214
SUPERFAMILY 582 812 231 SSF56784 none none IPR023214
Phobius 193 329 137 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 428 750 323 PF00702 none haloacid dehalogenase-like hydrolase IPR023214
TIGRFAM 69 817 749 TIGR01517 none ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type IPR006408
Pfam 89 156 68 PF00690 none Cation transporter/ATPase, N-terminus IPR004014
PRINTS 736 755 20 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757

5 Localization

Analysis Start End Length
TMHMM 327 349 22
TMHMM 377 399 22
TMHMM 133 155 22
TMHMM 170 192 22
TMHMM 797 819 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting