Protein : Qrob_P0665570.2 Q. robur
Protein Identifier  ? Qrob_P0665570.2 Organism . Name  Quercus robur
Protein Description  (M=6) K09285 - AP2-like factor, ANT lineage Alias (in v1)  Qrob_P0273510.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 653  
Kegg Orthology  K09285
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0007275 multicellular organismal development The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100257805 27 651 + 625 Gaps:31 99.85 653 74.54 0.0 AP2-like ethylene-responsive transcription factor ANT-like
blastp_kegg lcl|tcc:TCM_000844 1 652 + 652 Gaps:26 100.00 672 72.92 0.0 Integrase-type DNA-binding superfamily protein
blastp_kegg lcl|cit:102617899 16 652 + 637 Gaps:33 97.35 680 70.24 0.0 AP2-like ethylene-responsive transcription factor ANT-like
blastp_kegg lcl|pop:POPTR_0014s01260g 27 651 + 625 Gaps:35 99.85 659 71.12 0.0 POPTRDRAFT_572000 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10025111mg 27 652 + 626 Gaps:33 100.00 651 70.20 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0007s14690g 16 630 + 615 Gaps:40 92.93 679 70.05 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa002612mg 47 651 + 605 Gaps:37 95.09 652 72.26 0.0 hypothetical protein
blastp_kegg lcl|pmum:103336202 16 651 + 636 Gaps:56 96.53 692 69.61 0.0 AP2-like ethylene-responsive transcription factor ANT
blastp_kegg lcl|pvu:PHAVU_003G232600g 1 651 + 651 Gaps:21 99.85 659 66.57 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_034652 16 652 + 637 Gaps:45 97.94 680 62.76 0.0 Integrase-type DNA-binding superfamily protein
blastp_uniprot_sprot sp|Q38914|ANT_ARATH 1 498 + 498 Gaps:50 81.62 555 62.25 7e-133 AP2-like ethylene-responsive transcription factor ANT OS Arabidopsis thaliana GN ANT PE 1 SV 2
blastp_uniprot_sprot sp|Q1PFE1|AIL1_ARATH 258 496 + 239 Gaps:5 58.31 415 74.79 3e-118 AP2-like ethylene-responsive transcription factor AIL1 OS Arabidopsis thaliana GN AIL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5YGP7|PLET2_ARATH 254 500 + 247 Gaps:9 44.01 568 72.40 3e-116 AP2-like ethylene-responsive transcription factor PLT2 OS Arabidopsis thaliana GN PLT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5YGP8|PLET1_ARATH 254 500 + 247 Gaps:11 42.51 574 72.95 6e-112 AP2-like ethylene-responsive transcription factor PLT1 OS Arabidopsis thaliana GN PLT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PQQ3|AIL5_ARATH 282 515 + 234 Gaps:3 42.47 558 68.35 4e-108 AP2-like ethylene-responsive transcription factor AIL5 OS Arabidopsis thaliana GN AIL5 PE 2 SV 2
blastp_uniprot_sprot sp|Q6PQQ4|BBM_ARATH 297 511 + 215 Gaps:10 36.13 584 78.20 2e-107 AP2-like ethylene-responsive transcription factor BBM OS Arabidopsis thaliana GN BBM PE 2 SV 2
blastp_uniprot_sprot sp|Q8LSN2|BBM2_BRANA 305 521 + 217 Gaps:7 38.69 579 73.66 2e-107 AP2-like ethylene-responsive transcription factor BBM2 OS Brassica napus GN BBM2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L3U3|BBM1_BRANA 260 500 + 241 Gaps:12 40.59 579 71.91 4e-107 AP2-like ethylene-responsive transcription factor BBM1 OS Brassica napus GN BBM1 PE 2 SV 1
blastp_uniprot_sprot sp|Q52QU2|AIL6_ARATH 290 499 + 210 Gaps:1 35.97 581 73.68 1e-92 AP2-like ethylene-responsive transcription factor AIL6 OS Arabidopsis thaliana GN AIL6 PE 2 SV 1
blastp_uniprot_sprot sp|Q6J9N8|AIL7_ARATH 205 499 + 295 Gaps:21 56.22 498 59.64 3e-92 AP2-like ethylene-responsive transcription factor AIL7 OS Arabidopsis thaliana GN AIL7 PE 2 SV 2
rpsblast_cdd gnl|CDD|197689 317 480 + 164 Gaps:11 100.00 64 60.94 1e-22 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 316 476 + 161 Gaps:7 100.00 61 65.57 2e-17 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 417 466 + 50 Gaps:3 96.23 53 45.10 4e-08 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 416 480 65 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
SMART 317 386 70 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
Coils 381 402 22 Coil none none none
SUPERFAMILY 415 475 61 SSF54171 none none IPR016177
ProSiteProfiles 416 474 59 PS51032 none AP2/ERF domain profile. IPR001471
Gene3D 317 381 65 G3DSA:3.30.730.10 none none IPR001471
Gene3D 416 474 59 G3DSA:3.30.730.10 none none IPR001471
PANTHER 243 603 361 PTHR32467:SF5 none none none
PANTHER 70 221 152 PTHR32467:SF5 none none none
SUPERFAMILY 316 382 67 SSF54171 none none IPR016177
ProSiteProfiles 317 380 64 PS51032 none AP2/ERF domain profile. IPR001471
PRINTS 456 476 21 PR00367 none Ethylene responsive element binding protein signature IPR001471
PRINTS 318 329 12 PR00367 none Ethylene responsive element binding protein signature IPR001471
Pfam 316 372 57 PF00847 none AP2 domain IPR001471
Pfam 417 466 50 PF00847 none AP2 domain IPR001471
PANTHER 243 603 361 PTHR32467 none none IPR031112
PANTHER 70 221 152 PTHR32467 none none IPR031112

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9

0 Targeting