Protein : Qrob_P0664110.2 Q. robur
Protein Identifier  ? Qrob_P0664110.2 Organism . Name  Quercus robur
Protein Description  (M=2) PTHR11709:SF9 - LACCASE Alias (in v1)  Qrob_P0274110.1
Code Enzyme  EC:1.10.3.2 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 571  
Kegg Orthology  K05909
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0005507 copper ion binding Interacting selectively and non-covalently with copper (Cu) ions.
GO:0048046 apoplast The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it.
GO:0046274 lignin catabolic process The chemical reactions and pathways resulting in the breakdown of lignins, a class of polymers of phenylpropanoid units.
GO:0052716 hydroquinone:oxygen oxidoreductase activity Catalysis of the reaction: 4 hydroquinone + O2 = 4 benzosemiquinone + 4 H2O.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sot:102596063 6 570 + 565 Gaps:15 98.95 570 71.63 0.0 laccase-7-like
blastp_kegg lcl|sly:101250120 6 570 + 565 Gaps:14 98.60 571 71.40 0.0 laccase-7-like
blastp_kegg lcl|vvi:100251157 17 570 + 554 Gaps:13 97.17 565 70.49 0.0 laccase-7-like
blastp_kegg lcl|pop:POPTR_0006s09520g 1 570 + 570 Gaps:14 100.00 562 70.11 0.0 POPTRDRAFT_560853 laccase family protein
blastp_kegg lcl|cit:102628641 1 570 + 570 Gaps:15 100.00 569 69.95 0.0 laccase-7-like
blastp_kegg lcl|cic:CICLE_v10011375mg 1 570 + 570 Gaps:15 100.00 569 69.77 0.0 hypothetical protein
blastp_kegg lcl|pmum:103338484 1 570 + 570 Gaps:15 100.00 563 71.23 0.0 laccase-7
blastp_kegg lcl|pxb:103949424 1 570 + 570 Gaps:14 100.00 564 68.44 0.0 laccase-7-like
blastp_kegg lcl|fve:101299310 1 555 + 555 Gaps:11 96.99 565 71.53 0.0 laccase-7-like
blastp_kegg lcl|sot:102582004 6 556 + 551 Gaps:13 96.15 572 71.45 0.0 laccase-7-like
blastp_pdb 1asq_B 25 550 + 526 Gaps:84 92.75 552 32.81 4e-63 mol:protein length:552 ASCORBATE OXIDASE
blastp_pdb 1asq_A 25 550 + 526 Gaps:84 92.75 552 32.81 4e-63 mol:protein length:552 ASCORBATE OXIDASE
blastp_pdb 1asp_B 25 550 + 526 Gaps:84 92.75 552 32.81 4e-63 mol:protein length:552 ASCORBATE OXIDASE
blastp_pdb 1asp_A 25 550 + 526 Gaps:84 92.75 552 32.81 4e-63 mol:protein length:552 ASCORBATE OXIDASE
blastp_pdb 1aso_B 25 550 + 526 Gaps:84 92.75 552 32.81 4e-63 mol:protein length:552 ASCORBATE OXIDASE
blastp_pdb 1aso_A 25 550 + 526 Gaps:84 92.75 552 32.81 4e-63 mol:protein length:552 ASCORBATE OXIDASE
blastp_pdb 1aoz_B 25 550 + 526 Gaps:84 92.75 552 32.81 4e-63 mol:protein length:552 ASCORBATE OXIDASE
blastp_pdb 1aoz_A 25 550 + 526 Gaps:84 92.75 552 32.81 4e-63 mol:protein length:552 ASCORBATE OXIDASE
blastp_pdb 2qt6_B 42 554 + 513 Gaps:115 90.76 498 32.30 9e-43 mol:protein length:498 Laccase
blastp_pdb 2qt6_A 42 554 + 513 Gaps:115 90.76 498 32.30 9e-43 mol:protein length:498 Laccase
blastp_uniprot_sprot sp|Q9SR40|LAC7_ARATH 8 555 + 548 Gaps:17 95.77 567 64.46 0.0 Laccase-7 OS Arabidopsis thaliana GN LAC7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LFD1|LAC9_ARATH 9 570 + 562 Gaps:21 95.05 586 56.73 0.0 Laccase-9 OS Arabidopsis thaliana GN LAC9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LFD2|LAC8_ARATH 9 570 + 562 Gaps:21 95.03 584 56.04 0.0 Laccase-8 OS Arabidopsis thaliana GN LAC8 PE 2 SV 1
blastp_uniprot_sprot sp|Q0IP28|LAC25_ORYSJ 4 570 + 567 Gaps:21 99.13 577 54.20 0.0 Laccase-25 OS Oryza sativa subsp. japonica GN LAC25 PE 3 SV 1
blastp_uniprot_sprot sp|Q2QUN2|LAC24_ORYSJ 26 556 + 531 Gaps:18 92.75 579 56.61 0.0 Laccase-24 OS Oryza sativa subsp. japonica GN LAC24 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FLB5|LAC12_ARATH 7 570 + 564 Gaps:23 98.58 565 54.58 0.0 Laccase-12 OS Arabidopsis thaliana GN LAC12 PE 2 SV 1
blastp_uniprot_sprot sp|Q941X2|LAC3_ORYSJ 12 570 + 559 Gaps:31 97.00 567 56.73 0.0 Laccase-3 OS Oryza sativa subsp. japonica GN LAC3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SIY8|LAC5_ARATH 6 570 + 565 Gaps:32 98.45 580 52.19 0.0 Laccase-5 OS Arabidopsis thaliana GN LAC5 PE 2 SV 1
blastp_uniprot_sprot sp|Q56YT0|LAC3_ARATH 3 570 + 568 Gaps:33 99.12 570 53.10 0.0 Laccase-3 OS Arabidopsis thaliana GN LAC3 PE 2 SV 2
blastp_uniprot_sprot sp|Q5N7A3|LAC6_ORYSJ 11 554 + 544 Gaps:14 95.17 580 53.62 0.0 Laccase-6 OS Oryza sativa subsp. japonica GN LAC6 PE 2 SV 1

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 21 168 148 SSF49503 none none IPR008972
Pfam 31 144 114 PF07732 none Multicopper oxidase IPR011707
SUPERFAMILY 152 345 194 SSF49503 none none IPR008972
PANTHER 439 570 132 PTHR11709:SF9 none none none
PANTHER 1 423 423 PTHR11709:SF9 none none none
SUPERFAMILY 349 420 72 SSF49503 none none IPR008972
SUPERFAMILY 449 567 119 SSF49503 none none IPR008972
Gene3D 163 342 180 G3DSA:2.60.40.420 none none IPR008972
Pfam 157 313 157 PF00394 none Multicopper oxidase IPR001117
Phobius 23 570 548 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 6 17 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 439 570 132 PTHR11709 none none none
Gene3D 33 162 130 G3DSA:2.60.40.420 none none IPR008972
Gene3D 352 570 219 G3DSA:2.60.40.420 none none IPR008972
Phobius 18 22 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 1 423 423 PTHR11709 none none none
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 420 554 135 PF07731 none Multicopper oxidase IPR011706
TIGRFAM 23 570 548 TIGR03389 none laccase: laccase IPR017761

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 22 21
SignalP_GRAM_POSITIVE 1 22 21
SignalP_EUK 1 22 21

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1

0 Targeting