Protein : Qrob_P0656160.2 Q. robur
Protein Identifier  ? Qrob_P0656160.2 Organism . Name  Quercus robur
Score  96.4 Score Type  egn
Protein Description  (M=1) PTHR13683:SF230 - CATHEPSIN D (PTHR13683:SF230) Code Enzyme  EC:3.4.23.40
Gene Prediction Quality  validated Protein length 

Sequence

Length: 228  
Kegg Orthology  K08245
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0006629 lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO:0006665 sphingolipid metabolic process The chemical reactions and pathways involving sphingolipids, any of a class of lipids containing the long-chain amine diol sphingosine or a closely related base (a sphingoid).
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004190 aspartic-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.
GO:0005764 lysosome A small lytic vacuole that has cell cycle-independent morphology and is found in most animal cells and that contains a variety of hydrolases, most of which have their maximal activities in the pH range 5-6. The contained enzymes display latency if properly isolated. About 40 different lysosomal hydrolases are known and lysosomes have a great variety of morphologies and functions.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103421679 19 227 + 209 none 51.48 406 82.30 4e-125 aspartic proteinase A1-like
blastp_kegg lcl|tcc:TCM_002083 13 227 + 215 none 39.09 550 81.40 6e-125 Aspartic protease isoform 2
blastp_kegg lcl|cic:CICLE_v10017754mg 19 227 + 209 Gaps:1 43.21 486 80.48 5e-123 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa004349mg 19 227 + 209 none 40.58 515 81.82 1e-122 hypothetical protein
blastp_kegg lcl|cit:102628488 19 227 + 209 Gaps:1 40.86 514 80.48 1e-122 aspartic proteinase-like
blastp_kegg lcl|pxb:103944551 19 227 + 209 none 40.98 510 80.86 4e-122 aspartic proteinase A1-like
blastp_kegg lcl|pmum:103329303 19 227 + 209 none 40.58 515 81.34 7e-122 aspartic proteinase A1-like
blastp_kegg lcl|pxb:103938812 19 227 + 209 none 40.82 512 80.38 5e-121 aspartic proteinase A1-like
blastp_kegg lcl|mdm:103404836 19 227 + 209 none 38.85 538 80.38 2e-120 aspartic proteinase A1-like
blastp_kegg lcl|fve:101296033 19 227 + 209 Gaps:2 40.97 515 77.73 1e-117 aspartic proteinase A1-like
blastp_pdb 1qdm_C 20 227 + 208 none 43.51 478 69.71 1e-106 mol:protein length:478 PROPHYTEPSIN
blastp_pdb 1qdm_B 20 227 + 208 none 43.51 478 69.71 1e-106 mol:protein length:478 PROPHYTEPSIN
blastp_pdb 1qdm_A 20 227 + 208 none 43.51 478 69.71 1e-106 mol:protein length:478 PROPHYTEPSIN
blastp_pdb 1b5f_D 141 227 + 87 Gaps:1 98.85 87 73.26 6e-37 mol:protein length:87 PROTEIN (CARDOSIN A)
blastp_pdb 1b5f_B 141 227 + 87 Gaps:1 98.85 87 73.26 6e-37 mol:protein length:87 PROTEIN (CARDOSIN A)
blastp_pdb 3rfi_A 30 136 + 107 Gaps:1 98.15 108 50.00 1e-31 mol:protein length:108 Asp
blastp_pdb 1lyw_H 135 227 + 93 none 38.59 241 51.61 1e-29 mol:protein length:241 CATHEPSIN D
blastp_pdb 1lyw_F 135 227 + 93 none 38.59 241 51.61 1e-29 mol:protein length:241 CATHEPSIN D
blastp_pdb 1lyw_D 135 227 + 93 none 38.59 241 51.61 1e-29 mol:protein length:241 CATHEPSIN D
blastp_pdb 1lyw_B 135 227 + 93 none 38.59 241 51.61 1e-29 mol:protein length:241 CATHEPSIN D
blastp_uniprot_sprot sp|O04057|ASPR_CUCPE 20 227 + 208 none 40.55 513 74.52 3e-115 Aspartic proteinase OS Cucurbita pepo PE 2 SV 1
blastp_uniprot_sprot sp|O65390|APA1_ARATH 19 227 + 209 none 41.30 506 76.08 3e-115 Aspartic proteinase A1 OS Arabidopsis thaliana GN APA1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VYL3|APA2_ARATH 20 226 + 207 none 40.35 513 72.46 3e-110 Aspartic proteinase A2 OS Arabidopsis thaliana GN APA2 PE 2 SV 1
blastp_uniprot_sprot sp|P42210|ASPR_HORVU 20 227 + 208 none 40.94 508 69.71 8e-106 Phytepsin OS Hordeum vulgare PE 1 SV 1
blastp_uniprot_sprot sp|Q42456|ASPR1_ORYSJ 20 227 + 208 none 40.86 509 67.79 5e-103 Aspartic proteinase oryzasin-1 OS Oryza sativa subsp. japonica GN Os05g0567100 PE 2 SV 2
blastp_uniprot_sprot sp|P40782|CYPR1_CYNCA 19 227 + 209 Gaps:2 43.76 473 67.15 7e-99 Cyprosin (Fragment) OS Cynara cardunculus GN CYPRO1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9XFX3|CARDA_CYNCA 20 227 + 208 Gaps:1 41.07 504 63.77 2e-92 Procardosin-A OS Cynara cardunculus GN cardA PE 1 SV 1
blastp_uniprot_sprot sp|Q9XEC4|APA3_ARATH 19 227 + 209 Gaps:3 40.55 508 63.11 3e-91 Aspartic proteinase A3 OS Arabidopsis thaliana GN APA3 PE 1 SV 1
blastp_uniprot_sprot sp|P42211|ASPRX_ORYSJ 20 227 + 208 Gaps:5 40.93 496 62.07 5e-91 Aspartic proteinase OS Oryza sativa subsp. japonica GN RAP PE 2 SV 2
blastp_uniprot_sprot sp|Q9XFX4|CARDB_CYNCA 12 226 + 215 Gaps:3 41.90 506 58.96 9e-89 Procardosin-B OS Cynara cardunculus GN cardB PE 1 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 99 226 128 PF00026 none Eukaryotic aspartyl protease IPR001461
Gene3D 20 33 14 G3DSA:2.40.70.10 none none IPR021109
Gene3D 139 226 88 G3DSA:2.40.70.10 none none IPR021109
Pfam 35 69 35 PF03489 none Saposin-like type B, region 2 IPR008138
Gene3D 34 70 37 G3DSA:1.10.225.10 none none IPR011001
Gene3D 98 138 41 G3DSA:1.10.225.10 none none IPR011001
SUPERFAMILY 122 226 105 SSF50630 none none IPR021109
PANTHER 140 226 87 PTHR13683:SF230 none none none
PANTHER 140 226 87 PTHR13683 none none IPR001461
PRINTS 45 63 19 PR01797 none Saposin signature IPR008373
PRINTS 98 120 23 PR01797 none Saposin signature IPR008373
ProSiteProfiles 97 138 42 PS50015 none Saposin B type domain profile. IPR008139
Pfam 99 136 38 PF05184 none Saposin-like type B, region 1 IPR007856
SUPERFAMILY 34 136 103 SSF47862 none none IPR011001
ProSiteProfiles 33 73 41 PS50015 none Saposin B type domain profile. IPR008139

0 Localization

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting