Protein : Qrob_P0641380.2 Q. robur
Protein Identifier  ? Qrob_P0641380.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR31311:SF5 - XYLOGLUCAN 6-XYLOSYLTRANSFERASE-RELATED (PTHR31311:SF5) Code Enzyme  EC:2.4.2.39
Gene Prediction Quality  validated Protein length 

Sequence

Length: 454  
Kegg Orthology  K08238
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016757 transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0005794 Golgi apparatus A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membranes, appearing in sections as a characteristic shallow semicircle so that the convex side (cis or entry face) abuts the endoplasmic reticulum, secretory vesicles emerging from the concave side (trans or exit face). In vertebrate cells there is usually one such organelle, while in invertebrates and plants, where they are known usually as dictyosomes, there may be several scattered in the cytoplasm. The Golgi apparatus processes proteins produced on the ribosomes of the rough endoplasmic reticulum; such processing includes modification of the core oligosaccharides of glycoproteins, and the sorting and packaging of proteins for transport to a variety of cellular locations. Three different regions of the Golgi are now recognized both in terms of structure and function: cis, in the vicinity of the cis face, trans, in the vicinity of the trans face, and medial, lying between the cis and trans regions.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103483843 1 453 + 453 Gaps:2 99.78 456 86.59 0.0 putative glycosyltransferase 2
blastp_kegg lcl|csv:101231976 1 453 + 453 Gaps:2 99.78 456 86.37 0.0 putative glycosyltransferase 2-like
blastp_kegg lcl|csv:101203121 1 453 + 453 Gaps:2 99.78 456 86.37 0.0 putative glycosyltransferase 2-like
blastp_kegg lcl|mdm:103403759 1 453 + 453 Gaps:7 99.78 461 84.78 0.0 CAMTA1 calmodulin binding transcription activator 1
blastp_kegg lcl|mdm:103425655 1 453 + 453 Gaps:7 99.78 461 84.78 0.0 putative glycosyltransferase 2
blastp_kegg lcl|mdm:103416784 1 453 + 453 Gaps:7 99.78 461 84.78 0.0 putative glycosyltransferase 2
blastp_kegg lcl|mtr:MTR_4g119880 1 453 + 453 Gaps:3 100.00 454 85.90 0.0 Xyloglucan 6-xylosyltransferase
blastp_kegg lcl|pxb:103943652 1 448 + 448 Gaps:9 98.27 463 85.05 0.0 putative glycosyltransferase 2
blastp_kegg lcl|rcu:RCOM_0681050 1 453 + 453 Gaps:8 100.00 461 83.30 0.0 Xyloglucan 6-xylosyltransferase putative (EC:2.4.2.39)
blastp_kegg lcl|mdm:103423987 1 453 + 453 Gaps:9 100.00 460 83.48 0.0 putative glycosyltransferase 2
blastp_uniprot_sprot sp|O22775|GT2_ARATH 1 453 + 453 Gaps:9 99.78 461 81.09 0.0 Putative glycosyltransferase 2 OS Arabidopsis thaliana GN GT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LZJ3|XT1_ARATH 1 453 + 453 Gaps:6 99.78 460 77.34 0.0 Xyloglucan 6-xylosyltransferase OS Arabidopsis thaliana GN XT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LF80|GT3_ARATH 8 439 + 432 Gaps:23 89.50 457 60.39 0.0 Putative glycosyltransferase 3 OS Arabidopsis thaliana GN GT3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CA75|GT5_ARATH 13 439 + 427 Gaps:24 88.62 457 60.49 0.0 Putative glycosyltransferase 5 OS Arabidopsis thaliana GN GT5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M9U0|GT4_ARATH 20 439 + 420 Gaps:44 90.06 513 51.95 5e-174 Putative glycosyltransferase 4 OS Arabidopsis thaliana GN GT4 PE 2 SV 1
blastp_uniprot_sprot sp|Q564G7|GMGT1_CYATE 106 420 + 315 Gaps:33 78.62 435 42.40 7e-95 Galactomannan galactosyltransferase 1 OS Cyamopsis tetragonoloba GN GMGT1 PE 1 SV 1
blastp_uniprot_sprot sp|O81007|GT7_ARATH 78 416 + 339 Gaps:43 82.85 449 40.32 1e-94 Putative glycosyltransferase 7 OS Arabidopsis thaliana GN GT7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZG1|GT6_ARATH 100 416 + 317 Gaps:43 81.02 432 41.14 4e-93 Glycosyltransferase 6 OS Arabidopsis thaliana GN GT6 PE 2 SV 1
blastp_uniprot_sprot sp|O94622|YBKD_SCHPO 140 375 + 236 Gaps:85 62.67 375 23.83 4e-07 Uncharacterized alpha-1 2-galactosyltransferase C1289.13c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC1289.13c PE 3 SV 1
rpsblast_cdd gnl|CDD|178724 1 445 + 445 Gaps:16 100.00 429 72.03 0.0 PLN03182 PLN03182 xyloglucan 6-xylosyltransferase Provisional.
rpsblast_cdd gnl|CDD|178723 106 416 + 311 Gaps:43 75.94 453 47.67 1e-112 PLN03181 PLN03181 glycosyltransferase Provisional.
rpsblast_cdd gnl|CDD|203296 141 381 + 241 Gaps:57 99.58 239 39.50 2e-68 pfam05637 Glyco_transf_34 galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.
rpsblast_kog gnl|CDD|39945 19 413 + 395 Gaps:41 99.45 364 36.19 1e-107 KOG4748 KOG4748 KOG4748 Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism Cell wall/membrane/envelope biogenesis].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 21 39 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 40 453 414 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 3 453 451 PTHR31311 none none none
Pfam 142 381 240 PF05637 none galactosyl transferase GMA12/MNN10 family IPR008630
PANTHER 3 453 451 PTHR31311:SF5 none none none

1 Localization

Analysis Start End Length
TMHMM 21 40 19

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting