Protein : Qrob_P0629540.2 Q. robur
Protein Identifier  ? Qrob_P0629540.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 2.1.3.2 - Aspartate carbamoyltransferase. Code Enzyme  EC:2.1.3.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 402  
Kegg Orthology  K00609
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016597 amino acid binding Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents.
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.
GO:0006520 cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.
GO:0004070 aspartate carbamoyltransferase activity Catalysis of the reaction: L-aspartate + carbamoyl phosphate = N-carbamoyl-L-aspartate + H(+) + phosphate.
GO:0016743 carboxyl- or carbamoyltransferase activity Catalysis of the transfer of a carboxyl- or carbamoyl group from one compound (donor) to another (acceptor).

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa006647mg 1 401 + 401 none 100.00 401 81.05 0.0 hypothetical protein
blastp_kegg lcl|pmum:103326530 1 401 + 401 Gaps:8 100.00 393 80.92 0.0 aspartate carbamoyltransferase 1 chloroplastic
blastp_kegg lcl|vvi:100246977 4 401 + 398 Gaps:5 99.50 403 78.80 0.0 aspartate carbamoyltransferase 2 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10025758mg 4 401 + 398 Gaps:5 99.51 405 79.90 0.0 hypothetical protein
blastp_kegg lcl|gmx:100796746 1 401 + 401 Gaps:3 100.00 398 78.39 0.0 aspartate carbamoyltransferase 3 chloroplastic-like
blastp_kegg lcl|cit:102625657 4 401 + 398 Gaps:5 99.51 405 79.40 0.0 aspartate carbamoyltransferase 3 chloroplastic-like
blastp_kegg lcl|tcc:TCM_030814 1 401 + 401 Gaps:2 100.00 401 80.80 0.0 Pyrimidine b
blastp_kegg lcl|cam:101515686 1 401 + 401 Gaps:10 100.00 391 79.03 0.0 aspartate carbamoyltransferase 3 chloroplastic-like
blastp_kegg lcl|fve:101296168 1 392 + 392 none 88.49 443 79.08 0.0 aspartate carbamoyltransferase 2 chloroplastic-like
blastp_kegg lcl|cmo:103491094 1 401 + 401 none 100.00 401 76.31 0.0 aspartate carbamoyltransferase chloroplastic
blastp_pdb 1ml4_A 97 398 + 302 Gaps:3 97.08 308 49.50 6e-91 mol:protein length:308 Aspartate Transcarbamoylase
blastp_pdb 4ekn_B 112 398 + 287 Gaps:4 92.48 306 50.88 3e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_N 112 398 + 287 Gaps:4 92.48 306 50.88 3e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_M 112 398 + 287 Gaps:4 92.48 306 50.88 3e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_L 112 398 + 287 Gaps:4 92.48 306 50.88 3e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_K 112 398 + 287 Gaps:4 92.48 306 50.88 3e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_J 112 398 + 287 Gaps:4 92.48 306 50.88 3e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_I 112 398 + 287 Gaps:4 92.48 306 50.88 3e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_F 112 398 + 287 Gaps:4 92.48 306 50.88 3e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_pdb 3e2p_E 112 398 + 287 Gaps:4 92.48 306 50.88 3e-90 mol:protein length:306 Aspartate carbamoyltransferase
blastp_uniprot_sprot sp|Q43087|PYRB2_PEA 1 401 + 401 Gaps:16 100.00 385 77.66 0.0 Aspartate carbamoyltransferase 2 chloroplastic OS Pisum sativum GN PYRB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q43064|PYRB3_PEA 1 401 + 401 Gaps:10 100.00 391 76.47 0.0 Aspartate carbamoyltransferase 3 chloroplastic OS Pisum sativum GN PYRB3 PE 2 SV 1
blastp_uniprot_sprot sp|Q43086|PYRB1_PEA 67 401 + 335 Gaps:2 87.31 386 83.98 0.0 Aspartate carbamoyltransferase 1 chloroplastic OS Pisum sativum GN PYRB1 PE 2 SV 1
blastp_uniprot_sprot sp|P49077|PYRB_ARATH 1 401 + 401 Gaps:13 100.00 390 73.59 0.0 Aspartate carbamoyltransferase chloroplastic OS Arabidopsis thaliana GN PYRB PE 2 SV 2
blastp_uniprot_sprot sp|Q9LD61|PYRB_ORYSJ 93 400 + 308 Gaps:5 86.23 363 83.07 0.0 Aspartate carbamoyltransferase chloroplastic OS Oryza sativa subsp. japonica GN PYRB PE 2 SV 1
blastp_uniprot_sprot sp|Q8U373|PYRB_PYRFU 97 398 + 302 Gaps:3 97.08 308 51.84 1e-94 Aspartate carbamoyltransferase OS Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN pyrB PE 3 SV 1
blastp_uniprot_sprot sp|O58451|PYRB_PYRHO 97 398 + 302 Gaps:3 97.08 308 49.83 2e-92 Aspartate carbamoyltransferase OS Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN pyrB PE 3 SV 1
blastp_uniprot_sprot sp|A5UMP0|PYRB_METS3 91 398 + 308 Gaps:4 96.20 316 46.71 1e-91 Aspartate carbamoyltransferase OS Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN pyrB PE 3 SV 1
blastp_uniprot_sprot sp|B6YXW4|PYRB_THEON 97 398 + 302 Gaps:3 96.45 310 49.16 1e-90 Aspartate carbamoyltransferase OS Thermococcus onnurineus (strain NA1) GN pyrB PE 3 SV 1
blastp_uniprot_sprot sp|P20054|PYR1_DICDI 103 398 + 296 Gaps:4 13.12 2225 52.05 2e-90 Protein PYR1-3 OS Dictyostelium discoideum GN pyr1-3 PE 1 SV 3

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 238 385 148 G3DSA:3.40.50.1370 none none IPR006130
Phobius 18 401 384 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 92 389 298 PTHR11405 none none none
Gene3D 99 237 139 G3DSA:3.40.50.1370 none none IPR006130
Phobius 2 12 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PRINTS 379 393 15 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
PRINTS 225 242 18 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
PRINTS 357 362 6 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
PRINTS 171 180 10 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
PRINTS 131 153 23 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
PRINTS 317 326 10 PR00101 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase signature IPR002082
ProSitePatterns 141 148 8 PS00097 none Aspartate and ornithine carbamoyltransferases signature. IPR006130
Phobius 1 17 17 SIGNAL_PEPTIDE none Signal peptide region none
TIGRFAM 97 398 302 TIGR00670 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" asp_carb_tr: aspartate carbamoyltransferase IPR002082
Hamap 95 400 306 MF_00001 "KEGG:00240+2.1.3.2","KEGG:00250+2.1.3.2","MetaCyc:PWY-5686","UniPathway:UPA00070" Aspartate carbamoyltransferase [pyrB]. IPR002082
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 13 17 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 98 239 142 PF02729 none Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain IPR006132
SUPERFAMILY 93 398 306 SSF53671 none none IPR006130
PRINTS 353 362 10 PR00100 none Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130
PRINTS 363 386 24 PR00100 none Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130
PRINTS 141 160 20 PR00100 none Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130
PRINTS 226 237 12 PR00100 none Aspartate/ornithine carbamoyltransferase superfamily signature IPR006130
Pfam 245 397 153 PF00185 none Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain IPR006131

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting