Protein : Qrob_P0628650.2 Q. robur
Protein Identifier  ? Qrob_P0628650.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K01620 - threonine aldolase [EC:4.1.2.5] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 359  
Kegg Orthology  K01620
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0016829 lyase activity Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
GO:0006520 cellular amino acid metabolic process The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_026193 1 357 + 357 none 99.72 358 82.91 0.0 L-allo-threonine aldolase isoform 4
blastp_kegg lcl|vvi:100265578 1 357 + 357 none 98.08 364 82.63 0.0 L-allo-threonine aldolase-like
blastp_kegg lcl|pop:POPTR_0019s03530g 1 357 + 357 Gaps:1 99.72 359 81.84 0.0 POPTRDRAFT_826083 L-allo-threonine aldolase-related family protein
blastp_kegg lcl|rcu:RCOM_0609060 1 357 + 357 none 99.72 358 82.07 0.0 l-allo-threonine aldolase putative (EC:4.1.2.5)
blastp_kegg lcl|pop:POPTR_0013s04350g 1 358 + 358 Gaps:4 100.00 356 80.34 0.0 POPTRDRAFT_729883 L-allo-threonine aldolase-related family protein
blastp_kegg lcl|csv:101227531 1 358 + 358 Gaps:1 100.00 359 78.27 0.0 L-allo-threonine aldolase-like
blastp_kegg lcl|cit:102610938 1 357 + 357 Gaps:1 99.72 359 79.05 0.0 uncharacterized LOC102610938
blastp_kegg lcl|csv:101207481 1 358 + 358 Gaps:1 100.00 359 78.27 0.0 L-allo-threonine aldolase-like
blastp_kegg lcl|gmx:100800811 1 357 + 357 Gaps:2 85.27 421 77.99 0.0 uncharacterized LOC100800811
blastp_kegg lcl|pper:PRUPE_ppa007684mg 1 356 + 356 none 99.16 359 79.49 0.0 hypothetical protein
blastp_pdb 2fm1_D 6 347 + 342 Gaps:6 94.65 355 47.62 2e-95 mol:protein length:355 L-allo-threonine aldolase
blastp_pdb 2fm1_C 6 347 + 342 Gaps:6 94.65 355 47.62 2e-95 mol:protein length:355 L-allo-threonine aldolase
blastp_pdb 2fm1_B 6 347 + 342 Gaps:6 94.65 355 47.62 2e-95 mol:protein length:355 L-allo-threonine aldolase
blastp_pdb 2fm1_A 6 347 + 342 Gaps:6 94.65 355 47.62 2e-95 mol:protein length:355 L-allo-threonine aldolase
blastp_pdb 1m6s_D 6 347 + 342 Gaps:6 96.83 347 47.62 2e-95 mol:protein length:347 L-allo-threonine aldolase
blastp_pdb 1m6s_C 6 347 + 342 Gaps:6 96.83 347 47.62 2e-95 mol:protein length:347 L-allo-threonine aldolase
blastp_pdb 1m6s_B 6 347 + 342 Gaps:6 96.83 347 47.62 2e-95 mol:protein length:347 L-allo-threonine aldolase
blastp_pdb 1m6s_A 6 347 + 342 Gaps:6 96.83 347 47.62 2e-95 mol:protein length:347 L-allo-threonine aldolase
blastp_pdb 1lw5_D 6 347 + 342 Gaps:6 96.83 347 47.62 2e-95 mol:protein length:347 L-allo-threonine aldolase
blastp_pdb 1lw5_C 6 347 + 342 Gaps:6 96.83 347 47.62 2e-95 mol:protein length:347 L-allo-threonine aldolase
blastp_uniprot_sprot sp|O07051|LTAA_AERJA 4 349 + 346 Gaps:11 99.11 338 49.55 2e-96 L-allo-threonine aldolase OS Aeromonas jandaei GN ltaA PE 1 SV 1
blastp_uniprot_sprot sp|Q21890|YF64_CAEEL 5 349 + 345 Gaps:20 83.54 413 42.90 4e-82 Uncharacterized protein R102.4 OS Caenorhabditis elegans GN R102.4 PE 3 SV 3
blastp_uniprot_sprot sp|P75823|LTAE_ECOLI 6 338 + 333 Gaps:14 95.80 333 42.63 7e-80 Low specificity L-threonine aldolase OS Escherichia coli (strain K12) GN ltaE PE 1 SV 1
blastp_uniprot_sprot sp|P58319|LTAE_ECO57 6 338 + 333 Gaps:14 95.80 333 42.63 2e-79 Low specificity L-threonine aldolase OS Escherichia coli O157:H7 GN ltaE PE 3 SV 1
blastp_uniprot_sprot sp|O13427|GLY1_CANAX 7 349 + 343 Gaps:14 89.57 374 35.82 2e-53 Low-specificity L-threonine aldolase OS Candida albicans GN GLY1 PE 3 SV 1
blastp_uniprot_sprot sp|O13940|GLY1_SCHPO 7 339 + 333 Gaps:26 84.31 376 39.75 3e-53 Probable low-specificity L-threonine aldolase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN gly1 PE 3 SV 1
blastp_uniprot_sprot sp|O74267|GLY1_ASHGO 7 357 + 351 Gaps:20 90.31 382 35.94 4e-50 Low-specificity L-threonine aldolase OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN GLY1 PE 3 SV 3
blastp_uniprot_sprot sp|P37303|GLY1_YEAST 2 339 + 338 Gaps:16 84.75 387 34.76 3e-44 Low specificity L-threonine aldolase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN GLY1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9UW18|TOXG_COCCA 7 356 + 350 Gaps:24 88.95 389 32.66 8e-34 Alanine racemase TOXG OS Cochliobolus carbonum GN TOXG PE 3 SV 1
rpsblast_cdd gnl|CDD|178323 1 352 + 352 Gaps:1 99.43 353 78.63 0.0 PLN02721 PLN02721 threonine aldolase.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 1 356 356 PIRSF017617 none none IPR023603
SUPERFAMILY 6 350 345 SSF53383 none none IPR015424
Gene3D 256 349 94 G3DSA:3.90.1150.10 none none IPR015422
Gene3D 4 255 252 G3DSA:3.40.640.10 none none IPR015421
PANTHER 3 349 347 PTHR10289:SF5 none none none
PANTHER 3 349 347 PTHR10289 none none none
Pfam 7 294 288 PF01212 none Beta-eliminating lyase IPR001597

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting