Protein : Qrob_P0596800.2 Q. robur

Protein Identifier  ? Qrob_P0596800.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR11921:SF23 - SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN Code Enzyme  EC:1.3.5.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 189  
Kegg Orthology  K00235

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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0009055 electron carrier activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
GO:0006099 tricarboxylic acid cycle A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.
GO:0051536 iron-sulfur cluster binding Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|ath:AT5G65165 1 186 + 186 none 48.22 309 84.56 9e-89 SDH2-3 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3
blastp_kegg lcl|aly:ARALYDRAFT_332733 1 186 + 186 none 48.22 309 83.22 5e-88 SDH2-3 succinate dehydrogenase 2-3
blastp_kegg lcl|pper:PRUPE_ppa016428mg 1 186 + 186 none 48.85 305 85.23 6e-88 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0325190 1 186 + 186 none 47.60 313 83.89 9e-88 succinate dehydrogenase putative (EC:1.3.5.1)
blastp_kegg lcl|pper:PRUPE_ppa018743mg 1 186 + 186 none 47.91 311 83.22 1e-87 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10027704mg 1 186 + 186 none 48.22 309 83.22 2e-87 hypothetical protein
blastp_kegg lcl|eus:EUTSA_v10005495mg 1 186 + 186 none 48.38 308 83.89 3e-87 hypothetical protein
blastp_kegg lcl|pmum:103332757 1 186 + 186 none 47.91 311 82.55 4e-87 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3 mitochondrial-like
blastp_kegg lcl|sly:101253277 1 186 + 186 none 48.22 309 83.22 6e-87 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3 mitochondrial-like
blastp_kegg lcl|pmum:103332741 1 186 + 186 none 50.17 297 83.89 7e-87 succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3 mitochondrial-like
blastp_pdb 2wqy_O 1 185 + 185 Gaps:1 59.13 252 65.10 7e-66 mol:protein length:252 SUCCINATE DEHYDROGENASE IP SUBUNIT
blastp_pdb 2wqy_B 1 185 + 185 Gaps:1 59.13 252 65.10 7e-66 mol:protein length:252 SUCCINATE DEHYDROGENASE IP SUBUNIT
blastp_pdb 2h89_B 1 185 + 185 Gaps:1 59.13 252 65.10 7e-66 mol:protein length:252 Succinate dehydrogenase Ip subunit
blastp_pdb 2h88_O 1 185 + 185 Gaps:1 59.13 252 65.10 7e-66 mol:protein length:252 Succinate dehydrogenase Ip subunit
blastp_pdb 2h88_B 1 185 + 185 Gaps:1 59.13 252 65.10 7e-66 mol:protein length:252 Succinate dehydrogenase Ip subunit
blastp_pdb 2fbw_O 1 185 + 185 Gaps:1 59.13 252 65.10 7e-66 mol:protein length:252 succinate dehydrogenase Ip subunit
blastp_pdb 2fbw_B 1 185 + 185 Gaps:1 59.13 252 65.10 7e-66 mol:protein length:252 succinate dehydrogenase Ip subunit
blastp_pdb 1yq4_B 1 185 + 185 Gaps:1 59.13 252 65.10 7e-66 mol:protein length:252 succinate dehydrogenase Ip subunit
blastp_pdb 1yq3_B 1 185 + 185 Gaps:1 59.13 252 65.10 7e-66 mol:protein length:252 succinate dehydrogenase Ip subunit
blastp_pdb 3aeg_B 1 185 + 185 Gaps:1 59.13 252 61.07 3e-62 mol:protein length:252 Succinate dehydrogenase [ubiquinone] iron-sul
blastp_uniprot_sprot sp|Q9FJP9|DHSB3_ARATH 1 186 + 186 none 48.22 309 84.56 3e-90 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3 mitochondrial OS Arabidopsis thaliana GN SDH2-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LB02|DHSB2_ARATH 1 186 + 186 Gaps:5 53.21 280 73.15 1e-68 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2 mitochondrial OS Arabidopsis thaliana GN SDH2-2 PE 1 SV 2
blastp_uniprot_sprot sp|Q70KF8|DHSB_UROFA 1 186 + 186 Gaps:1 52.30 283 67.57 1e-67 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit mitochondrial OS Uromyces fabae GN SDH2 PE 3 SV 1
blastp_uniprot_sprot sp|Q8LBZ7|DHSB1_ARATH 38 186 + 149 Gaps:4 53.41 279 72.48 2e-67 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1 mitochondrial OS Arabidopsis thaliana GN SDH2-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q6FWS8|DHSB_CANGA 1 185 + 185 none 58.50 253 66.89 2e-67 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit mitochondrial OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN SDH2 PE 3 SV 1
blastp_uniprot_sprot sp|O42772|DHSB_MYCGR 1 186 + 186 none 50.17 297 66.44 3e-67 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit mitochondrial OS Mycosphaerella graminicola GN SDH2 PE 3 SV 1
blastp_uniprot_sprot sp|Q75CI4|DHSB_ASHGO 1 185 + 185 none 56.70 261 64.86 2e-66 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit mitochondrial OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN SDH2 PE 3 SV 1
blastp_uniprot_sprot sp|P21801|DHSB_YEAST 38 185 + 148 none 55.64 266 64.86 8e-66 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit mitochondrial OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN SDH2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9YHT2|DHSB_CHICK 1 185 + 185 Gaps:1 51.38 290 65.10 5e-65 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit mitochondrial OS Gallus gallus GN SDHB PE 1 SV 1
blastp_uniprot_sprot sp|A5PL98|DHSB_DANRE 1 185 + 185 Gaps:1 53.21 280 63.09 3e-64 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit mitochondrial OS Danio rerio GN sdhb PE 2 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 38 186 149 PTHR11921:SF23 none none none
ProSitePatterns 152 163 12 PS00198 none 4Fe-4S ferredoxin-type iron-sulfur binding region signature. IPR017900
ProSiteProfiles 142 172 31 PS51379 none 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. IPR017896
SUPERFAMILY 36 109 74 SSF54292 none none IPR001041
Gene3D 40 109 70 G3DSA:3.10.20.30 none none IPR012675
Gene3D 1 39 39 G3DSA:3.10.20.30 none none IPR012675
Pfam 39 114 76 PF13085 "KEGG:00020+1.3.5.1","KEGG:00190+1.3.5.1","KEGG:00650+1.3.5.1","KEGG:00720+1.3.5.1","MetaCyc:PWY-3781","MetaCyc:PWY-4302","MetaCyc:PWY-561","MetaCyc:PWY-5690","MetaCyc:PWY-6728","MetaCyc:PWY-6969","MetaCyc:PWY-7254","MetaCyc:PWY-7279" 2Fe-2S iron-sulfur cluster binding domain IPR025192
SUPERFAMILY 111 186 76 SSF46548 none none IPR009051
TIGRFAM 39 185 147 TIGR00384 "KEGG:00020+1.3.5.1","KEGG:00190+1.3.5.1","KEGG:00650+1.3.5.1","KEGG:00720+1.3.5.1","MetaCyc:PWY-3781","MetaCyc:PWY-4302","MetaCyc:PWY-561","MetaCyc:PWY-5690","MetaCyc:PWY-6728","MetaCyc:PWY-6969","MetaCyc:PWY-7254","MetaCyc:PWY-7279" dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein IPR004489
Gene3D 111 187 77 G3DSA:1.10.1060.10 none none none
SUPERFAMILY 1 39 39 SSF54292 none none IPR001041
PANTHER 38 186 149 PTHR11921 none none none

0 Localization

0 Qtllist

0 Targeting