10 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0005524 | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
GO:0016020 | membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
GO:0004672 | protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. |
GO:0006468 | protein phosphorylation | The process of introducing a phosphate group on to a protein. |
GO:0055085 | transmembrane transport | The process in which a solute is transported from one side of a membrane to the other. |
GO:0016021 | integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
GO:0005886 | plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. |
GO:0008271 | secondary active sulfate transmembrane transporter activity | Catalysis of the secondary active transfer of sulfate from one side of the membrane to the other. Secondary active transport is catalysis of the transfer of a solute from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Chemiosmotic sources of energy include uniport, symport or antiport. |
GO:0008272 | sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
GO:0015116 | sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. |
50 Blast
23 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
SMART | 322 | 461 | 140 | SM00220 | none | Serine/Threonine protein kinases, catalytic domain | IPR002290 |
Phobius | 1 | 89 | 89 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
Phobius | 187 | 205 | 19 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
Phobius | 132 | 166 | 35 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
Phobius | 254 | 264 | 11 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
Gene3D | 387 | 446 | 60 | G3DSA:1.10.510.10 | none | none | none |
Phobius | 167 | 186 | 20 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
Pfam | 146 | 261 | 116 | PF00916 | none | Sulfate transporter family | IPR011547 |
Pfam | 67 | 134 | 68 | PF00916 | none | Sulfate transporter family | IPR011547 |
Phobius | 108 | 112 | 5 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
Phobius | 206 | 224 | 19 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
Phobius | 289 | 461 | 173 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
ProSiteProfiles | 296 | 461 | 166 | PS50011 | none | Protein kinase domain profile. | IPR000719 |
Gene3D | 329 | 386 | 58 | G3DSA:3.30.200.20 | none | none | none |
Phobius | 231 | 253 | 23 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
Phobius | 225 | 230 | 6 | CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | none |
PANTHER | 66 | 328 | 263 | PTHR11814 | "Reactome:REACT_15518";signature_desc=SULFATE TRANSPORTER | none | IPR001902 |
Phobius | 90 | 107 | 18 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
PANTHER | 66 | 328 | 263 | PTHR11814:SF65 | none | none | IPR030314 |
Phobius | 265 | 288 | 24 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
Pfam | 329 | 445 | 117 | PF00069 | none | Protein kinase domain | IPR000719 |
SUPERFAMILY | 328 | 445 | 118 | SSF56112 | none | none | IPR011009 |
Phobius | 113 | 131 | 19 | TRANSMEMBRANE | none | Region of a membrane-bound protein predicted to be embedded in the membrane. | none |
6 Localization
Analysis | Start | End | Length |
---|---|---|---|
TMHMM | 167 | 189 | 22 |
TMHMM | 113 | 135 | 22 |
TMHMM | 87 | 106 | 19 |
TMHMM | 231 | 253 | 22 |
TMHMM | 202 | 221 | 19 |
TMHMM | 266 | 288 | 22 |
8 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2014_vSeqBC_3P | Qrob_Chr10 | 10 | s_1A6CK6_610 | v_7092_29 | 4,28 | 0 | 23,27 | lod | 2,8619 | 7 |
Bourran2_2014_nFork*_3P | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,28 | 7,43 | 41,48 | lod | 2,4044 | 5,5 |
Bourran2_2015_nSeqBC_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 26,06 | 25,47 | 27,72 | lod | 3.6 | 7.1 |
Bourran2_2015_nP_3P | Qrob_Chr12 | 12 | v_10140_295 | v_838_303 | 16 | 14,69 | 18,01 | lod | 5.1 | 13.7 |
Bourran1_2004_QTL4_peak_Bud_burst_3P | Qrob_Chr04 | 4 | s_1AHUWN_1101 | s_1BRNG7_1618 | 30,55 | 0 | 47,55 | lod | 2,8 | 7,4 |
Bourran2_2002_QTL10_peak_Bud_burst_A4 | Qrob_Chr04 | 4 | s_1B59MJ_737 | s_1BGLSD_999 | 15,86 | 0 | 41,66 | lod | 2,8 | 4 |
Bourran1_2000_QTL3_peak_Bud_burst_3P | Qrob_Chr04 | 4 | s_1A6DJQ_418 | s_1A1PEC_1268 | 23,09 | 9,09 | 44,09 | lod | 2,3 | 6,8 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf | Qrob_Chr04 | 4 | s_1B91MJ_705 | s_1AHIKX_640 | 33.92 | 12,11 | 48,31 | lod | 6.1865 | 0.023 |