Protein : Qrob_P0585210.2 Q. robur
Protein Identifier  ? Qrob_P0585210.2 Organism . Name  Quercus robur
Score  69.0 Score Type  egn
Protein Description  (M=2) PTHR10504 - BACTERICIDAL PERMEABILITY-INCREASING (BPI) PROTEIN-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 636  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.
GO:0000287 magnesium ion binding Interacting selectively and non-covalently with magnesium (Mg) ions.
GO:0006096 glycolytic process The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.
GO:0004743 pyruvate kinase activity Catalysis of the reaction: ATP + pyruvate = ADP + phosphoenolpyruvate.
GO:0030955 potassium ion binding Interacting selectively and non-covalently with potassium (K+) ions.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa004392mg 1 496 + 496 Gaps:11 96.29 512 74.85 0.0 hypothetical protein
blastp_kegg lcl|pmum:103329182 1 496 + 496 Gaps:11 96.29 512 74.85 0.0 putative BPI/LBP family protein At1g04970
blastp_kegg lcl|pop:POPTR_0014s15890g 34 494 + 461 none 93.70 492 74.40 0.0 POPTRDRAFT_573035 lipid-binding serum glycoprotein
blastp_kegg lcl|tcc:TCM_002264 1 495 + 495 Gaps:7 99.00 499 70.04 0.0 Lipid-binding serum glycoprotein family protein isoform 1
blastp_kegg lcl|mdm:103442678 27 496 + 470 Gaps:11 95.25 505 72.14 0.0 LB putative BPI/LBP family protein At1g04970
blastp_kegg lcl|pxb:103955018 1 496 + 496 Gaps:19 99.21 505 71.06 0.0 putative BPI/LBP family protein At1g04970
blastp_kegg lcl|fve:101294577 14 505 + 492 Gaps:6 97.42 503 69.39 0.0 putative BPI/LBP family protein At1g04970-like
blastp_kegg lcl|vvi:100265388 1 495 + 495 Gaps:8 97.79 498 73.10 0.0 putative BPI/LBP family protein At3g20270-like
blastp_kegg lcl|cic:CICLE_v10014979mg 24 498 + 475 none 94.62 502 70.53 0.0 hypothetical protein
blastp_kegg lcl|cit:102628883 24 498 + 475 none 94.62 502 70.53 0.0 putative BPI/LBP family protein At1g04970-like
blastp_pdb 1bp1_A 39 486 + 448 Gaps:41 98.46 456 23.83 7e-26 mol:protein length:456 BACTERICIDAL/PERMEABILITY-INCREASING PROTEIN
blastp_pdb 1ewf_A 39 486 + 448 Gaps:41 98.46 456 23.61 2e-25 mol:protein length:456 BACTERICIDAL/PERMEABILITY-INCREASING PROTEIN
blastp_uniprot_sprot sp|Q9MAU5|Y1049_ARATH 29 496 + 468 none 95.90 488 65.60 0.0 Putative BPI/LBP family protein At1g04970 OS Arabidopsis thaliana GN At1g04970 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYC2|Y2070_ARATH 1 490 + 490 Gaps:14 92.43 515 43.28 5e-128 Putative BPI/LBP family protein At3g20270 OS Arabidopsis thaliana GN At3g20270 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M3B6|PKP4_ARATH 497 630 + 134 Gaps:2 18.59 710 57.58 3e-38 Plastidial pyruvate kinase 4 chloroplastic OS Arabidopsis thaliana GN PKP4 PE 2 SV 1
blastp_uniprot_sprot sp|Q2TBI0|LBP_BOVIN 39 490 + 452 Gaps:38 92.31 481 24.77 2e-29 Lipopolysaccharide-binding protein OS Bos taurus GN LBP PE 2 SV 1
blastp_uniprot_sprot sp|Q6AXU0|BPI_RAT 32 487 + 456 Gaps:35 94.40 482 24.40 6e-28 Bactericidal permeability-increasing protein OS Rattus norvegicus GN Bpi PE 2 SV 1
blastp_uniprot_sprot sp|P18428|LBP_HUMAN 41 486 + 446 Gaps:29 92.52 481 23.82 2e-26 Lipopolysaccharide-binding protein OS Homo sapiens GN LBP PE 1 SV 3
blastp_uniprot_sprot sp|Q61805|LBP_MOUSE 41 488 + 448 Gaps:27 92.93 481 23.71 1e-24 Lipopolysaccharide-binding protein OS Mus musculus GN Lbp PE 1 SV 2
blastp_uniprot_sprot sp|P17213|BPI_HUMAN 39 486 + 448 Gaps:41 92.20 487 23.61 1e-24 Bactericidal permeability-increasing protein OS Homo sapiens GN BPI PE 1 SV 4
blastp_uniprot_sprot sp|Q28739|BPI_RABIT 43 468 + 426 Gaps:22 95.73 445 22.30 2e-22 Bactericidal permeability-increasing protein (Fragment) OS Oryctolagus cuniculus GN BPI PE 2 SV 1
blastp_uniprot_sprot sp|P17453|BPI_BOVIN 41 487 + 447 Gaps:35 92.95 482 25.22 7e-22 Bactericidal permeability-increasing protein OS Bos taurus GN BPI PE 2 SV 2
rpsblast_cdd gnl|CDD|29338 289 484 + 196 Gaps:3 99.50 200 33.67 2e-45 cd00026 BPI2 BPI/LBP/CETP C-terminal domain Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) C-terminal domain binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative bacteria. Apolar pockets on the concave surface bind a molecule of phosphatidylcholine primarily by interacting with their acyl chains this suggests that the pockets may also bind the acyl chains of lipopolysaccharide..
rpsblast_cdd gnl|CDD|29337 36 262 + 227 Gaps:10 100.00 223 28.25 4e-31 cd00025 BPI1 BPI/LBP/CETP N-terminal domain Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative bacteria. Apolar pockets on the concave surface bind a molecule of phosphatidylcholine primarily by interacting with their acyl chains this suggests that the pockets may also bind the acyl chains of lipopolysaccharide..
rpsblast_cdd gnl|CDD|128624 286 472 + 187 Gaps:5 95.05 202 27.60 3e-25 smart00329 BPI2 BPI/LBP/CETP C-terminal domain. Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) C-terminal domain.
rpsblast_cdd gnl|CDD|184806 497 614 + 118 Gaps:4 19.08 608 39.66 6e-25 PRK14725 PRK14725 pyruvate kinase Provisional.
rpsblast_cdd gnl|CDD|202449 274 486 + 213 Gaps:5 91.60 238 25.69 6e-23 pfam02886 LBP_BPI_CETP_C LBP / BPI / CETP family C-terminal domain. The N and C terminal domains of the LBP/BPI/CETP family are structurally similar.
rpsblast_cdd gnl|CDD|29339 289 484 + 196 Gaps:13 99.52 208 29.47 7e-22 cd00264 BPI BPI/LBP/CETP domain Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative bacteria. Apolar pockets on the concave surface bind a molecule of phosphatidylcholine primarily by interacting with their acyl chains this suggests that the pockets may also bind the acyl chains of lipopolysaccharide..
rpsblast_cdd gnl|CDD|181277 505 617 + 113 Gaps:5 21.91 493 31.48 1e-18 PRK08187 PRK08187 pyruvate kinase Validated.
rpsblast_cdd gnl|CDD|201703 45 208 + 164 Gaps:13 93.87 163 21.57 8e-15 pfam01273 LBP_BPI_CETP LBP / BPI / CETP family N-terminal domain. The N and C terminal domains of the LBP/BPI/CETP family are structurally similar.

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 276 484 209 PF02886 none LBP / BPI / CETP family, C-terminal domain IPR001124
Pfam 532 624 93 PF00224 "KEGG:00010+2.7.1.40","KEGG:00230+2.7.1.40","KEGG:00620+2.7.1.40","MetaCyc:PWY-1042","MetaCyc:PWY-2221","MetaCyc:PWY-5484","MetaCyc:PWY-5723","MetaCyc:PWY-6142","MetaCyc:PWY-6886","MetaCyc:PWY-6901","MetaCyc:PWY-7003","MetaCyc:PWY-7218","MetaCyc:PWY-7383","Reactome:REACT_474","UniPathway:UPA00109" Pyruvate kinase, barrel domain IPR015793
PANTHER 39 518 480 PTHR10504 none none none
Gene3D 220 486 267 G3DSA:3.15.20.10 none none none
Gene3D 534 597 64 G3DSA:2.40.33.10 "KEGG:00010+2.7.1.40","KEGG:00230+2.7.1.40","KEGG:00620+2.7.1.40","MetaCyc:PWY-1042","MetaCyc:PWY-2221","MetaCyc:PWY-5484","MetaCyc:PWY-5723","MetaCyc:PWY-6142","MetaCyc:PWY-6886","MetaCyc:PWY-6901","MetaCyc:PWY-7003","MetaCyc:PWY-7218","MetaCyc:PWY-7383","Reactome:REACT_474","UniPathway:UPA00109" none IPR015806
Phobius 18 24 7 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 45 215 171 PF01273 none LBP / BPI / CETP family, N-terminal domain IPR017942
Gene3D 44 219 176 G3DSA:3.15.10.10 none none none
Phobius 6 17 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 503 597 95 SSF50800 none none IPR011037
PANTHER 39 518 480 PTHR10504:SF73 none none none
Phobius 25 635 611 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 41 250 210 SSF55394 none none IPR017943
SUPERFAMILY 279 486 208 SSF55394 none none IPR017943
SMART 41 266 226 SM00328 none BPI/LBP/CETP N-terminal domain IPR017942
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SMART 284 482 199 SM00329 none BPI/LBP/CETP C-terminal domain IPR001124

1 Localization

Analysis Start End Length
SignalP_EUK 1 24 23

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting