Protein : Qrob_P0573230.2 Q. robur
Protein Identifier  ? Qrob_P0573230.2 Organism . Name  Quercus robur
Score  99.1 Score Type  egn
Protein Description  (M=3) 2.7.7.72 - CCA tRNA nucleotidyltransferase. Code Enzyme  EC:2.7.7.72
Gene Prediction Quality  validated Protein length 

Sequence

Length: 211  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0006396 RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
GO:0016779 nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa004187mg 8 208 + 201 Gaps:2 37.98 524 81.91 4e-114 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_007G088400g 5 208 + 204 Gaps:2 34.46 592 82.35 5e-114 hypothetical protein
blastp_kegg lcl|cam:101495220 9 208 + 200 Gaps:2 35.91 557 83.00 4e-113 CCA tRNA nucleotidyltransferase mitochondrial-like
blastp_kegg lcl|pmum:103329795 8 208 + 201 Gaps:2 34.79 572 81.91 5e-113 putative CCA tRNA nucleotidyltransferase 2
blastp_kegg lcl|gmx:100792514 5 208 + 204 Gaps:2 35.48 575 80.39 4e-112 putative CCA tRNA nucleotidyltransferase 2-like
blastp_kegg lcl|mdm:103444874 14 208 + 195 Gaps:1 37.52 517 80.93 5e-111 CCA tRNA nucleotidyltransferase mitochondrial-like
blastp_kegg lcl|cmo:103496556 1 207 + 207 Gaps:2 35.53 577 80.00 9e-111 putative CCA tRNA nucleotidyltransferase 2
blastp_kegg lcl|csv:101216479 1 207 + 207 Gaps:2 35.53 577 80.00 1e-110 CCA tRNA nucleotidyltransferase mitochondrial-like
blastp_kegg lcl|pop:POPTR_0013s11570g 1 208 + 208 Gaps:3 39.20 528 80.19 1e-108 tRNA-nucleotidyltransferase family protein
blastp_kegg lcl|tcc:TCM_036384 7 208 + 202 Gaps:3 33.96 586 81.91 3e-106 Polynucleotide adenylyltransferase family protein isoform 1
blastp_pdb 3aqk_A 26 208 + 183 Gaps:40 42.27 414 33.14 2e-13 mol:protein length:414 Poly(A) polymerase
blastp_pdb 3aqn_B 26 208 + 183 Gaps:40 42.17 415 33.14 2e-13 mol:protein length:415 Poly(A) polymerase
blastp_pdb 3aqn_A 26 208 + 183 Gaps:40 42.17 415 33.14 2e-13 mol:protein length:415 Poly(A) polymerase
blastp_pdb 3aql_B 26 208 + 183 Gaps:40 42.17 415 33.14 2e-13 mol:protein length:415 Poly(A) polymerase
blastp_pdb 3aql_A 26 208 + 183 Gaps:40 42.17 415 33.14 2e-13 mol:protein length:415 Poly(A) polymerase
blastp_pdb 3aqm_B 26 208 + 183 Gaps:40 42.17 415 33.14 2e-13 mol:protein length:415 Poly(A) polymerase
blastp_pdb 3aqm_A 26 208 + 183 Gaps:40 42.17 415 33.14 2e-13 mol:protein length:415 Poly(A) polymerase
blastp_pdb 1vfg_B 48 208 + 161 Gaps:27 37.44 390 35.62 2e-13 mol:protein length:390 poly A polymerase
blastp_pdb 1vfg_A 48 208 + 161 Gaps:27 37.44 390 35.62 2e-13 mol:protein length:390 poly A polymerase
blastp_pdb 3h3a_B 32 207 + 176 Gaps:25 36.96 441 37.42 1e-11 mol:protein length:441 TRNA nucleotidyl transferase-related protein
blastp_uniprot_sprot sp|Q9P4S5|CCA1_CANGA 18 208 + 191 Gaps:10 37.48 531 53.77 9e-60 CCA tRNA nucleotidyltransferase mitochondrial OS Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN CCA1 PE 1 SV 2
blastp_uniprot_sprot sp|P21269|CCA1_YEAST 18 208 + 191 Gaps:11 36.63 546 51.00 1e-55 CCA tRNA nucleotidyltransferase mitochondrial OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN CCA1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9Y7U9|CCA2_SCHPO 18 208 + 191 Gaps:19 41.32 484 45.00 4e-47 Putative CCA tRNA nucleotidyltransferase 2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPCC645.10 PE 3 SV 1
blastp_uniprot_sprot sp|Q9UTQ0|CCA1_SCHPO 19 208 + 190 Gaps:5 38.60 500 47.15 1e-44 Putative CCA tRNA nucleotidyltransferase 1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC1093.04c PE 3 SV 2
blastp_uniprot_sprot sp|P44439|PCNB_HAEIN 48 207 + 160 Gaps:38 33.63 452 34.87 2e-14 Poly(A) polymerase I OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN pcnB PE 3 SV 1
blastp_uniprot_sprot sp|P0ABF1|PCNB_ECOLI 26 208 + 183 Gaps:40 37.63 465 33.14 7e-13 Poly(A) polymerase I OS Escherichia coli (strain K12) GN pcnB PE 1 SV 2
blastp_uniprot_sprot sp|P0ABF2|PCNB_ECOL6 26 208 + 183 Gaps:40 37.63 465 33.14 7e-13 Poly(A) polymerase I OS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN pcnB PE 3 SV 2
blastp_uniprot_sprot sp|P0ABF3|PCNB_ECO57 26 208 + 183 Gaps:40 37.63 465 33.14 7e-13 Poly(A) polymerase I OS Escherichia coli O157:H7 GN pcnB PE 3 SV 2
blastp_uniprot_sprot sp|Q8ZRQ8|PCNB_SALTY 26 208 + 183 Gaps:34 37.63 465 32.00 8e-13 Poly(A) polymerase I OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN pcnB PE 3 SV 2
blastp_uniprot_sprot sp|Q8Z9C3|PCNB_SALTI 26 208 + 183 Gaps:34 37.63 465 32.00 8e-13 Poly(A) polymerase I OS Salmonella typhi GN pcnB PE 3 SV 2

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 19 181 163 SSF81301 none none none
Gene3D 20 181 162 G3DSA:3.30.460.10 none none none
Gene3D 182 207 26 G3DSA:1.10.3090.10 none none none
SUPERFAMILY 184 207 24 SSF81891 none none none
PANTHER 13 207 195 PTHR13734 none none none
Pfam 46 184 139 PF01743 none Poly A polymerase head domain IPR002646
PANTHER 13 207 195 PTHR13734:SF5 none none none

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting