Protein : Qrob_P0568680.2 Q. robur
Protein Identifier  ? Qrob_P0568680.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR22981:SF54 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 2, MITOCHONDRIAL-RELATED (PTHR22981:SF54) Code Enzyme  EC:1.1.1.60
Gene Prediction Quality  validated Protein length 

Sequence

Length: 344  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity Catalysis of the reaction: 6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH + H+.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103428273 18 343 + 326 Gaps:23 99.35 307 78.03 9e-163 probable 3-hydroxyisobutyrate dehydrogenase-like 2 mitochondrial
blastp_kegg lcl|pper:PRUPE_ppa009081mg 46 343 + 298 Gaps:3 96.74 307 80.13 1e-162 hypothetical protein
blastp_kegg lcl|fve:101310515 46 343 + 298 Gaps:2 96.73 306 79.05 2e-162 probable 3-hydroxyisobutyrate dehydrogenase-like 3 mitochondrial-like
blastp_kegg lcl|pmum:103319074 46 343 + 298 Gaps:3 96.74 307 79.46 1e-161 probable 3-hydroxyisobutyrate dehydrogenase-like 2 mitochondrial
blastp_kegg lcl|pxb:103958136 18 343 + 326 Gaps:23 99.35 307 77.70 8e-161 probable 3-hydroxyisobutyrate dehydrogenase-like 2 mitochondrial
blastp_kegg lcl|cmo:103496122 16 343 + 328 Gaps:22 100.00 306 74.51 3e-160 probable 3-hydroxyisobutyrate dehydrogenase-like 3 mitochondrial
blastp_kegg lcl|cic:CICLE_v10001773mg 16 343 + 328 Gaps:22 91.34 335 75.16 8e-160 hypothetical protein
blastp_kegg lcl|csv:101221094 16 343 + 328 Gaps:22 100.00 306 75.16 1e-158 uncharacterized LOC101221094
blastp_kegg lcl|cit:102615474 16 343 + 328 Gaps:22 100.00 306 74.18 1e-157 probable 3-hydroxyisobutyrate dehydrogenase-like 2 mitochondrial-like
blastp_kegg lcl|gmx:100816810 47 342 + 296 Gaps:1 95.47 309 74.92 2e-157 probable 3-hydroxyisobutyrate dehydrogenase-like 3 mitochondrial-like
blastp_pdb 1yb4_B 50 338 + 289 Gaps:8 95.93 295 37.81 2e-54 mol:protein length:295 tartronic semialdehyde reductase
blastp_pdb 1yb4_A 50 338 + 289 Gaps:8 95.93 295 37.81 2e-54 mol:protein length:295 tartronic semialdehyde reductase
blastp_pdb 1vpd_A 50 340 + 291 Gaps:7 95.65 299 34.97 4e-51 mol:protein length:299 TARTRONATE SEMIALDEHYDE REDUCTASE
blastp_pdb 4dll_B 46 342 + 297 Gaps:9 90.62 320 34.83 6e-40 mol:protein length:320 2-hydroxy-3-oxopropionate reductase
blastp_pdb 4dll_A 46 342 + 297 Gaps:9 90.62 320 34.83 6e-40 mol:protein length:320 2-hydroxy-3-oxopropionate reductase
blastp_pdb 3pef_H 50 339 + 290 Gaps:7 99.30 287 31.58 2e-32 mol:protein length:287 6-phosphogluconate dehydrogenase NAD-binding
blastp_pdb 3pef_G 50 339 + 290 Gaps:7 99.30 287 31.58 2e-32 mol:protein length:287 6-phosphogluconate dehydrogenase NAD-binding
blastp_pdb 3pef_F 50 339 + 290 Gaps:7 99.30 287 31.58 2e-32 mol:protein length:287 6-phosphogluconate dehydrogenase NAD-binding
blastp_pdb 3pef_E 50 339 + 290 Gaps:7 99.30 287 31.58 2e-32 mol:protein length:287 6-phosphogluconate dehydrogenase NAD-binding
blastp_pdb 3pef_D 50 339 + 290 Gaps:7 99.30 287 31.58 2e-32 mol:protein length:287 6-phosphogluconate dehydrogenase NAD-binding
blastp_uniprot_sprot sp|Q949M8|3HID3_ARATH 46 342 + 297 Gaps:12 89.62 318 62.81 4e-107 Probable 3-hydroxyisobutyrate dehydrogenase-like 3 mitochondrial OS Arabidopsis thaliana GN At1g71180 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C991|3HID2_ARATH 46 342 + 297 Gaps:10 95.99 299 62.02 7e-107 Probable 3-hydroxyisobutyrate dehydrogenase-like 2 mitochondrial OS Arabidopsis thaliana GN At1g71170 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZE1|3HID1_ARATH 46 341 + 296 Gaps:7 87.13 334 49.14 2e-92 Probable 3-hydroxyisobutyrate dehydrogenase-like 1 mitochondrial OS Arabidopsis thaliana GN At4g29120 PE 2 SV 1
blastp_uniprot_sprot sp|O34948|YKWC_BACSU 48 333 + 286 Gaps:7 97.57 288 38.08 2e-65 Uncharacterized oxidoreductase YkwC OS Bacillus subtilis (strain 168) GN ykwC PE 3 SV 1
blastp_uniprot_sprot sp|P77161|GLXR_ECOLI 50 338 + 289 Gaps:8 96.92 292 37.46 6e-54 2-hydroxy-3-oxopropionate reductase OS Escherichia coli (strain K12) GN glxR PE 2 SV 1
blastp_uniprot_sprot sp|P0ABQ2|GARR_ECOLI 50 340 + 291 Gaps:7 97.28 294 34.97 4e-50 2-hydroxy-3-oxopropionate reductase OS Escherichia coli (strain K12) GN garR PE 1 SV 1
blastp_uniprot_sprot sp|P0ABQ3|GARR_ECOL6 50 340 + 291 Gaps:7 97.28 294 34.97 4e-50 2-hydroxy-3-oxopropionate reductase OS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN garR PE 3 SV 1
blastp_uniprot_sprot sp|O33730|Y1503_SHEFN 50 339 + 290 Gaps:6 98.28 291 32.87 3e-42 Uncharacterized oxidoreductase Sfri_1503 OS Shewanella frigidimarina (strain NCIMB 400) GN Sfri_1503 PE 3 SV 2
blastp_uniprot_sprot sp|Q55702|Y229_SYNY3 49 334 + 286 Gaps:7 96.90 290 31.32 3e-34 Uncharacterized oxidoreductase slr0229 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN slr0229 PE 3 SV 1
blastp_uniprot_sprot sp|Q0QLF5|HMGD_EUBBA 45 342 + 298 Gaps:10 97.67 301 32.99 7e-31 2-(hydroxymethyl)glutarate dehydrogenase OS Eubacterium barkeri GN Hgd PE 1 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 47 210 164 G3DSA:3.40.50.720 none none IPR016040
SUPERFAMILY 49 208 160 SSF51735 none none none
Pfam 213 335 123 PF14833 none NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase IPR029154
SUPERFAMILY 212 342 131 SSF48179 none none IPR008927
PANTHER 46 342 297 PTHR22981 none none none
Pfam 49 210 162 PF03446 none NAD binding domain of 6-phosphogluconate dehydrogenase IPR006115
PIRSF 46 343 298 PIRSF000103 none none IPR015815
Gene3D 213 342 130 G3DSA:1.10.1040.10 none none IPR013328
PANTHER 46 342 297 PTHR22981:SF54 none none none

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting