Protein : Qrob_P0554590.2 Q. robur
Protein Identifier  ? Qrob_P0554590.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=31) K01537 - Ca2+-transporting ATPase [EC:3.6.3.8] Code Enzyme  EC:3.6.3.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 835  
Kegg Orthology  K01537
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0005388 calcium-transporting ATPase activity Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans).
GO:0070588 calcium ion transmembrane transport A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.

49 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103451029 27 829 + 803 Gaps:12 78.90 1033 72.88 0.0 calcium-transporting ATPase 12 plasma membrane-type-like
blastp_kegg lcl|pxb:103954414 27 829 + 803 Gaps:13 78.92 1034 72.67 0.0 calcium-transporting ATPase 12 plasma membrane-type-like
blastp_kegg lcl|tcc:TCM_026363 27 824 + 798 Gaps:12 79.72 1001 72.31 0.0 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
blastp_kegg lcl|vvi:100257170 26 824 + 799 Gaps:15 76.63 1057 69.63 0.0 calcium-transporting ATPase 12 plasma membrane-type-like
blastp_kegg lcl|cic:CICLE_v10000126mg 16 824 + 809 Gaps:6 78.86 1031 71.22 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa017146mg 27 824 + 798 Gaps:9 79.66 1013 72.74 0.0 hypothetical protein
blastp_kegg lcl|pmum:103331169 27 824 + 798 Gaps:9 79.27 1018 72.61 0.0 putative calcium-transporting ATPase 13 plasma membrane-type
blastp_kegg lcl|cic:CICLE_v10000132mg 27 824 + 798 Gaps:7 78.42 1024 71.86 0.0 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10000129mg 27 824 + 798 Gaps:7 78.42 1024 71.11 0.0 hypothetical protein
blastp_kegg lcl|cit:102615001 27 824 + 798 Gaps:7 78.42 1024 70.98 0.0 calcium-transporting ATPase 12 plasma membrane-type-like
blastp_pdb 3kdp_C 137 817 + 681 Gaps:85 70.74 998 30.88 6e-79 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3kdp_A 137 817 + 681 Gaps:85 70.74 998 30.88 6e-79 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_C 137 817 + 681 Gaps:85 70.74 998 30.88 6e-79 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_A 137 817 + 681 Gaps:85 70.74 998 30.88 6e-79 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n2f_C 137 817 + 681 Gaps:85 71.17 992 30.88 7e-79 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n2f_A 137 817 + 681 Gaps:85 71.17 992 30.88 7e-79 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_C 137 817 + 681 Gaps:85 71.17 992 30.88 7e-79 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_A 137 817 + 681 Gaps:85 71.17 992 30.88 7e-79 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3ixz_A 102 817 + 716 Gaps:114 71.57 1034 31.08 2e-78 mol:protein length:1034 Potassium-transporting ATPase alpha
blastp_pdb 2xzb_A 102 817 + 716 Gaps:114 71.57 1034 31.08 2e-78 mol:protein length:1034 POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1
blastp_uniprot_sprot sp|Q9LY77|ACA12_ARATH 27 824 + 798 Gaps:18 77.83 1033 63.68 0.0 Calcium-transporting ATPase 12 plasma membrane-type OS Arabidopsis thaliana GN ACA12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LIK7|ACA13_ARATH 28 824 + 797 Gaps:12 77.97 1017 63.05 0.0 Putative calcium-transporting ATPase 13 plasma membrane-type OS Arabidopsis thaliana GN ACA13 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LF79|ACA8_ARATH 77 824 + 748 Gaps:11 69.74 1074 54.61 0.0 Calcium-transporting ATPase 8 plasma membrane-type OS Arabidopsis thaliana GN ACA8 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SZR1|ACA10_ARATH 77 824 + 748 Gaps:11 70.44 1069 53.65 0.0 Calcium-transporting ATPase 10 plasma membrane-type OS Arabidopsis thaliana GN ACA10 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LU41|ACA9_ARATH 77 824 + 748 Gaps:16 69.24 1086 55.45 0.0 Calcium-transporting ATPase 9 plasma membrane-type OS Arabidopsis thaliana GN ACA9 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M2L4|ACA11_ARATH 79 824 + 746 Gaps:27 71.12 1025 48.15 0.0 Putative calcium-transporting ATPase 11 plasma membrane-type OS Arabidopsis thaliana GN ACA11 PE 1 SV 1
blastp_uniprot_sprot sp|O22218|ACA4_ARATH 77 824 + 748 Gaps:30 71.26 1030 47.68 0.0 Calcium-transporting ATPase 4 plasma membrane-type OS Arabidopsis thaliana GN ACA4 PE 1 SV 1
blastp_uniprot_sprot sp|Q2RAS0|ACA5_ORYSJ 27 824 + 798 Gaps:50 77.68 1017 46.84 0.0 Probable calcium-transporting ATPase 5 plasma membrane-type OS Oryza sativa subsp. japonica GN Os11g0140400 PE 3 SV 1
blastp_uniprot_sprot sp|Q2QY12|ACA4_ORYSJ 78 824 + 747 Gaps:32 70.93 1039 47.35 0.0 Probable calcium-transporting ATPase 4 plasma membrane-type OS Oryza sativa subsp. japonica GN Os12g0136900 PE 3 SV 1
blastp_uniprot_sprot sp|Q37145|ACA1_ARATH 81 826 + 746 Gaps:32 72.35 1020 48.10 0.0 Calcium-transporting ATPase 1 chloroplastic OS Arabidopsis thaliana GN ACA1 PE 1 SV 3

42 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 78 824 747 PTHR24093:SF254 none none none
Pfam 439 759 321 PF00702 none haloacid dehalogenase-like hydrolase IPR023214
Gene3D 645 802 158 G3DSA:3.40.50.1000 none none IPR023214
Pfam 186 434 249 PF00122 none E1-E2 ATPase IPR008250
PRINTS 745 764 20 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 266 280 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 442 456 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 769 781 13 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 638 649 12 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 660 670 11 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
Phobius 184 203 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 101 167 67 PF00690 none Cation transporter/ATPase, N-terminus IPR004014
Phobius 204 336 133 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 52 150 99 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 337 358 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 151 172 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 432 644 213 G3DSA:3.40.1110.10 none none IPR023299
PANTHER 78 824 747 PTHR24093 none none none
Phobius 1 29 29 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 449 642 194 SSF81660 none none IPR023299
Phobius 359 387 29 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
TIGRFAM 90 828 739 TIGR01517 none ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type IPR006408
Phobius 173 183 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SMART 92 172 81 SM00831 none Cation transporter/ATPase, N-terminus IPR004014
SUPERFAMILY 220 316 97 SSF81653 none none none
ProSitePatterns 444 450 7 PS00154 none E1-E2 ATPases phosphorylation site. IPR018303
SUPERFAMILY 593 819 227 SSF56784 none none IPR023214
SUPERFAMILY 440 460 21 SSF56784 none none IPR023214
Phobius 388 414 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 596 614 19 PR00120 none H+-transporting ATPase (proton pump) signature IPR001757

4 Localization

Analysis Start End Length
TMHMM 155 172 17
TMHMM 182 201 19
TMHMM 337 359 22
TMHMM 388 410 22

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting