Protein : Qrob_P0548670.2 Q. robur
Protein Identifier  ? Qrob_P0548670.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K05610 - ubiquitin carboxyl-terminal hydrolase L5 [EC:3.4.19.12] Code Enzyme  EC:3.4.19.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 178  
Kegg Orthology  K05610
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0004843 ubiquitin-specific protease activity Catalysis of the thiol-dependent hydrolysis of a peptide bond formed by the C-terminal glycine of ubiquitin.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100792356 9 177 + 169 Gaps:1 50.90 334 89.41 3e-98 ubiquitin carboxyl-terminal hydrolase isozyme L5-like
blastp_kegg lcl|gmx:100802014 9 177 + 169 Gaps:1 50.90 334 88.24 8e-97 ubiquitin carboxyl-terminal hydrolase isozyme L5-like
blastp_kegg lcl|vvi:100251772 9 177 + 169 Gaps:1 50.90 334 85.29 2e-96 ubiquitin carboxyl-terminal hydrolase isozyme L5-like
blastp_kegg lcl|cam:101501791 9 177 + 169 Gaps:1 50.90 334 86.47 3e-96 ubiquitin carboxyl-terminal hydrolase isozyme L5-like
blastp_kegg lcl|cic:CICLE_v10028809mg 6 176 + 171 Gaps:1 51.50 334 85.47 4e-96 hypothetical protein
blastp_kegg lcl|cit:102614060 6 176 + 171 Gaps:1 51.50 334 85.47 4e-96 ubiquitin carboxyl-terminal hydrolase isozyme L5-like
blastp_kegg lcl|pper:PRUPE_ppa008376mg 9 177 + 169 Gaps:1 50.90 334 85.88 5e-96 hypothetical protein
blastp_kegg lcl|pop:POPTR_0004s13540g 9 177 + 169 Gaps:1 50.90 334 85.29 4e-95 POPTRDRAFT_800674 hypothetical protein
blastp_kegg lcl|pmum:103320965 9 177 + 169 Gaps:1 50.90 334 84.71 5e-95 ubiquitin carboxyl-terminal hydrolase isozyme L5
blastp_kegg lcl|pvu:PHAVU_007G118800g 9 174 + 166 Gaps:1 50.30 332 87.43 6e-95 hypothetical protein
blastp_pdb 3ihr_A 12 172 + 161 Gaps:21 43.90 328 52.78 2e-38 mol:protein length:328 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3ris_D 12 81 + 70 Gaps:4 26.94 245 54.55 1e-18 mol:protein length:245 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3ris_C 12 81 + 70 Gaps:4 26.94 245 54.55 1e-18 mol:protein length:245 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3ris_B 12 81 + 70 Gaps:4 26.94 245 54.55 1e-18 mol:protein length:245 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3ris_A 12 81 + 70 Gaps:4 26.94 245 54.55 1e-18 mol:protein length:245 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3rii_B 12 69 + 58 Gaps:4 23.18 233 59.26 4e-16 mol:protein length:233 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3rii_A 12 69 + 58 Gaps:4 23.18 233 59.26 4e-16 mol:protein length:233 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3a7s_A 12 69 + 58 Gaps:4 23.68 228 59.26 4e-16 mol:protein length:228 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3tb3_B 12 68 + 57 Gaps:4 23.14 229 58.49 1e-15 mol:protein length:229 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_pdb 3tb3_A 12 68 + 57 Gaps:4 23.14 229 58.49 1e-15 mol:protein length:229 Ubiquitin carboxyl-terminal hydrolase isozyme
blastp_uniprot_sprot sp|Q54N38|UCHL5_DICDI 12 174 + 163 Gaps:14 49.27 343 46.75 1e-41 Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS Dictyostelium discoideum GN uch2 PE 3 SV 1
blastp_uniprot_sprot sp|Q9Y5K5|UCHL5_HUMAN 12 172 + 161 Gaps:20 44.07 329 52.41 4e-39 Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS Homo sapiens GN UCHL5 PE 1 SV 3
blastp_uniprot_sprot sp|Q06AT3|UCHL5_PIG 12 172 + 161 Gaps:22 44.07 329 53.10 2e-38 Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS Sus scrofa GN UCHL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9WUP7|UCHL5_MOUSE 12 172 + 161 Gaps:20 44.07 329 51.72 2e-38 Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS Mus musculus GN Uchl5 PE 2 SV 2
blastp_uniprot_sprot sp|Q9XSJ0|UCHL5_BOVIN 12 172 + 161 Gaps:21 43.90 328 52.78 1e-37 Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS Bos taurus GN UCHL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q09444|UBH4_CAEEL 12 171 + 160 Gaps:28 41.12 321 42.42 2e-22 Probable ubiquitin carboxyl-terminal hydrolase ubh-4 OS Caenorhabditis elegans GN ubh-4 PE 3 SV 2
blastp_uniprot_sprot sp|B3MIV9|CALYP_DROAN 12 168 + 157 Gaps:31 37.45 470 28.41 6e-10 Ubiquitin carboxyl-terminal hydrolase calypso OS Drosophila ananassae GN calypso PE 3 SV 1
blastp_uniprot_sprot sp|Q9UUB6|UBLH2_SCHPO 11 177 + 167 Gaps:45 43.33 300 35.38 7e-10 Ubiquitin carboxyl-terminal hydrolase 2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN uch2 PE 1 SV 1
blastp_uniprot_sprot sp|B4HST0|CALYP_DROSE 12 168 + 157 Gaps:31 37.37 471 27.84 2e-09 Ubiquitin carboxyl-terminal hydrolase calypso OS Drosophila sechellia GN calypso PE 3 SV 1
blastp_uniprot_sprot sp|Q7K5N4|CALYP_DROME 12 168 + 157 Gaps:31 37.37 471 27.84 3e-09 Ubiquitin carboxyl-terminal hydrolase calypso OS Drosophila melanogaster GN calypso PE 1 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 62 90 29 Coil none none none
Gene3D 6 67 62 G3DSA:3.40.532.10 none none IPR001578
Pfam 7 52 46 PF01088 none Ubiquitin carboxyl-terminal hydrolase, family 1 IPR001578
SUPERFAMILY 6 67 62 SSF54001 none none none
Coils 103 138 36 Coil none none none
PANTHER 12 90 79 PTHR10589 none none IPR001578
PANTHER 107 172 66 PTHR10589 none none IPR001578

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting