Protein : Qrob_P0542640.2 Q. robur
Protein Identifier  ? Qrob_P0542640.2 Organism . Name  Quercus robur
Score  44.0 Score Type  egn
Protein Description  (M=1) PTHR13343:SF13 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN (PTHR13343:SF13) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 172  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0010181 FMN binding Interacting selectively and non-covalently with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007305mg 41 169 + 129 Gaps:20 39.95 373 65.77 3e-60 hypothetical protein
blastp_kegg lcl|mdm:103439812 41 169 + 129 Gaps:20 29.27 509 67.79 4e-60 uncharacterized protein At3g49140
blastp_kegg lcl|pmum:103333713 41 169 + 129 Gaps:20 28.99 514 67.11 1e-59 uncharacterized protein At3g49140
blastp_kegg lcl|pxb:103958207 42 169 + 128 Gaps:20 29.08 509 67.57 4e-59 uncharacterized protein At3g49140-like
blastp_kegg lcl|fve:101305312 26 169 + 144 Gaps:22 32.61 509 61.45 4e-57 uncharacterized protein At3g49140-like
blastp_kegg lcl|sly:101257144 20 169 + 150 Gaps:22 33.80 497 60.71 9e-57 uncharacterized LOC101257144
blastp_kegg lcl|pxb:103966146 32 169 + 138 Gaps:24 30.20 510 64.29 2e-55 uncharacterized protein At3g49140-like
blastp_kegg lcl|pxb:103964334 45 169 + 125 Gaps:20 28.66 506 65.52 3e-55 uncharacterized protein At3g49140-like
blastp_kegg lcl|tcc:TCM_015265 31 168 + 138 Gaps:20 30.62 516 60.13 6e-55 Pentatricopeptide repeat superfamily protein putative isoform 1
blastp_kegg lcl|sot:102601899 47 169 + 123 Gaps:20 28.77 497 66.43 1e-54 uncharacterized LOC102601899
blastp_uniprot_sprot sp|Q0WMN5|Y3913_ARATH 45 164 + 120 Gaps:20 28.06 499 45.00 9e-34 Uncharacterized protein At3g49140 OS Arabidopsis thaliana GN At3g49140 PE 1 SV 2

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 54 155 102 SSF50475 none none IPR012349
Gene3D 94 154 61 G3DSA:3.20.180.10 none none none
PANTHER 46 165 120 PTHR13343 none none none
PANTHER 46 165 120 PTHR13343:SF13 none none none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4

0 Targeting