Protein : Qrob_P0541330.2 Q. robur
Protein Identifier  ? Qrob_P0541330.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10638:SF18 - COPPER AMINE OXIDASE FAMILY PROTEIN (PTHR10638:SF18) Code Enzyme  EC:1.4.3.21
Gene Prediction Quality  validated Protein length 

Sequence

Length: 732  
Kegg Orthology  K00276
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0005507 copper ion binding Interacting selectively and non-covalently with copper (Cu) ions.
GO:0048038 quinone binding Interacting selectively and non-covalently with a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.
GO:0009308 amine metabolic process The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group, as carried out by individual cells. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.
GO:0008131 primary amine oxidase activity Catalysis of the reaction: a primary amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0001s07870g 1 731 + 731 Gaps:9 100.00 738 84.28 0.0 hypothetical protein
blastp_kegg lcl|fve:101298418 1 725 + 725 Gaps:6 99.18 729 83.26 0.0 primary amine oxidase-like
blastp_kegg lcl|rcu:RCOM_1679960 1 731 + 731 Gaps:11 100.00 730 82.88 0.0 Amine oxidase [copper-containing] precursor putative
blastp_kegg lcl|cic:CICLE_v10019032mg 1 731 + 731 Gaps:6 100.00 731 81.40 0.0 hypothetical protein
blastp_kegg lcl|cit:102628236 1 731 + 731 Gaps:6 100.00 731 81.53 0.0 primary amine oxidase-like
blastp_kegg lcl|pxb:103958325 1 731 + 731 Gaps:10 100.00 727 80.33 0.0 primary amine oxidase-like
blastp_kegg lcl|mdm:103407292 1 731 + 731 Gaps:10 100.00 727 80.33 0.0 primary amine oxidase-like
blastp_kegg lcl|pxb:103947299 1 731 + 731 Gaps:10 100.00 727 80.19 0.0 primary amine oxidase-like
blastp_kegg lcl|pmum:103337259 1 731 + 731 Gaps:9 100.00 726 80.03 0.0 primary amine oxidase-like
blastp_kegg lcl|tcc:TCM_016065 23 731 + 709 Gaps:3 97.00 734 80.62 0.0 Copper amine oxidase family protein
blastp_pdb 1ksi_B 79 725 + 647 Gaps:18 99.84 642 43.53 0.0 mol:protein length:642 COPPER AMINE OXIDASE
blastp_pdb 1ksi_A 79 725 + 647 Gaps:18 99.84 642 43.53 0.0 mol:protein length:642 COPPER AMINE OXIDASE
blastp_pdb 1w2z_D 80 725 + 646 Gaps:18 98.61 649 43.59 0.0 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1w2z_C 80 725 + 646 Gaps:18 98.61 649 43.59 0.0 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1w2z_B 80 725 + 646 Gaps:18 98.61 649 43.59 0.0 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 1w2z_A 80 725 + 646 Gaps:18 98.61 649 43.59 0.0 mol:protein length:649 AMINE OXIDASE COPPER CONTAINING
blastp_pdb 2woh_B 76 712 + 637 Gaps:40 86.80 727 33.12 4e-92 mol:protein length:727 PRIMARY AMINE OXIDASE
blastp_pdb 2woh_A 76 712 + 637 Gaps:40 86.80 727 33.12 4e-92 mol:protein length:727 PRIMARY AMINE OXIDASE
blastp_pdb 2wof_B 76 712 + 637 Gaps:40 86.80 727 33.12 4e-92 mol:protein length:727 PRIMARY AMINE OXIDASE
blastp_pdb 2wof_A 76 712 + 637 Gaps:40 86.80 727 33.12 4e-92 mol:protein length:727 PRIMARY AMINE OXIDASE
blastp_uniprot_sprot sp|Q8H1H9|AMO_ARATH 72 730 + 659 Gaps:3 92.70 712 62.42 0.0 Primary amine oxidase OS Arabidopsis thaliana GN At1g62810 PE 2 SV 1
blastp_uniprot_sprot sp|Q43077|AMO_PEA 80 725 + 646 Gaps:18 94.96 674 43.59 0.0 Primary amine oxidase OS Pisum sativum PE 1 SV 1
blastp_uniprot_sprot sp|P49252|AMO_LENCU 79 725 + 647 Gaps:18 96.10 667 43.37 0.0 Primary amine oxidase (Fragment) OS Lens culinaris PE 1 SV 3
blastp_uniprot_sprot sp|P80695|AMO_KLEOK 76 712 + 637 Gaps:40 83.91 752 33.44 3e-93 Primary amine oxidase OS Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN maoA PE 1 SV 2
blastp_uniprot_sprot sp|P46883|AMO_ECOLI 76 712 + 637 Gaps:40 83.36 757 33.12 3e-91 Primary amine oxidase OS Escherichia coli (strain K12) GN tynA PE 1 SV 1
blastp_uniprot_sprot sp|P49250|AMO_ENTAE 76 712 + 637 Gaps:42 83.58 755 32.81 7e-91 Primary amine oxidase OS Enterobacter aerogenes GN maoA PE 1 SV 1
blastp_uniprot_sprot sp|Q07123|AMO2_ARTS1 80 715 + 636 Gaps:33 94.91 648 31.54 1e-82 Copper methylamine oxidase OS Arthrobacter sp. (strain P1) GN maoII PE 1 SV 1
blastp_uniprot_sprot sp|Q07121|AMO1_ARTS1 80 715 + 636 Gaps:33 94.91 648 31.54 2e-82 Primary amine oxidase OS Arthrobacter sp. (strain P1) GN maoI PE 1 SV 1
blastp_uniprot_sprot sp|Q59118|AMOH_ARTGO 80 715 + 636 Gaps:27 90.50 684 30.86 7e-77 Histamine oxidase OS Arthrobacter globiformis PE 1 SV 3
blastp_uniprot_sprot sp|P46881|PAOX_ARTGO 193 725 + 533 Gaps:28 81.03 638 30.56 7e-66 Phenylethylamine oxidase OS Arthrobacter globiformis PE 1 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 171 270 100 PF02728 none Copper amine oxidase, N3 domain IPR015802
Phobius 28 731 704 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 78 162 85 SSF54416 none none IPR016182
Gene3D 259 720 462 G3DSA:2.70.98.20 none none IPR015798
ProSitePatterns 676 689 14 PS01165 none Copper amine oxidase copper-binding site signature. IPR000269
SUPERFAMILY 289 720 432 SSF49998 none none IPR015798
Pfam 293 717 425 PF01179 none Copper amine oxidase, enzyme domain IPR015798
Phobius 7 27 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 56 719 664 PTHR10638 none none IPR000269
Phobius 1 6 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 169 278 110 SSF54416 none none IPR016182
ProSitePatterns 451 464 14 PS01164 none Copper amine oxidase topaquinone signature. IPR000269
Pfam 80 160 81 PF02727 "KEGG:00260+1.4.3.21","KEGG:00350+1.4.3.21","KEGG:00360+1.4.3.21","KEGG:00410+1.4.3.21","KEGG:00950+1.4.3.21","KEGG:00960+1.4.3.21","MetaCyc:PWY-5751" Copper amine oxidase, N2 domain IPR015800
Gene3D 79 170 92 G3DSA:3.10.450.40 none none IPR015801
PANTHER 56 719 664 PTHR10638:SF18 none none none
Gene3D 172 258 87 G3DSA:3.10.450.40 none none IPR015801

1 Localization

Analysis Start End Length
TMHMM 5 27 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting