Protein : Qrob_P0534480.2 Q. robur
Protein Identifier  ? Qrob_P0534480.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 2.4.1.18 - 1,4-alpha-glucan branching enzyme. Code Enzyme  EC:2.4.1.18
Gene Prediction Quality  validated Protein length 

Sequence

Length: 928  
Kegg Orthology  K00700
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
GO:0043169 cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
GO:0003844 1,4-alpha-glucan branching enzyme activity Catalysis of the transfer of a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxyl group in a similar glucan chain.
GO:0005978 glycogen biosynthetic process The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103326413 1 869 + 869 Gaps:29 99.44 895 80.34 0.0 1 4-alpha-glucan-branching enzyme 3 chloroplastic/amyloplastic
blastp_kegg lcl|fve:101306710 1 869 + 869 Gaps:41 99.44 893 79.95 0.0 1 4-alpha-glucan-branching enzyme 3 chloroplastic/amyloplastic-like
blastp_kegg lcl|pxb:103946672 1 869 + 869 Gaps:29 99.44 895 79.89 0.0 1 4-alpha-glucan-branching enzyme 3 chloroplastic/amyloplastic
blastp_kegg lcl|tcc:TCM_030827 1 869 + 869 Gaps:28 99.44 900 77.88 0.0 Alpha amylase family protein isoform 1
blastp_kegg lcl|cmo:103490131 16 869 + 854 Gaps:37 97.70 912 77.78 0.0 1 4-alpha-glucan-branching enzyme 3 chloroplastic/amyloplastic
blastp_kegg lcl|csv:101205661 37 869 + 833 Gaps:25 94.70 906 79.60 0.0 1 4-alpha-glucan-branching enzyme 3 chloroplastic/amyloplastic-like
blastp_kegg lcl|cic:CICLE_v10007401mg 1 869 + 869 Gaps:29 99.45 901 77.12 0.0 hypothetical protein
blastp_kegg lcl|cit:102618514 1 869 + 869 Gaps:29 99.45 901 77.12 0.0 1 4-alpha-glucan-branching enzyme 3 chloroplastic/amyloplastic-like
blastp_kegg lcl|pper:PRUPE_ppa016544mg 1 869 + 869 Gaps:45 99.43 877 79.82 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0752570 1 866 + 866 Gaps:31 99.89 894 75.92 0.0 1 4-alpha-glucan branching enzyme putative (EC:2.4.1.18)
blastp_pdb 3amk_A 333 833 + 501 Gaps:36 76.50 702 40.04 1e-132 mol:protein length:702 Os06g0726400 protein
blastp_pdb 3aml_A 333 833 + 501 Gaps:36 71.13 755 40.04 3e-132 mol:protein length:755 Os06g0726400 protein
blastp_pdb 3k1d_A 367 832 + 466 Gaps:53 67.45 722 29.36 1e-39 mol:protein length:722 1 4-alpha-glucan-branching enzyme
blastp_pdb 1m7x_D 397 859 + 463 Gaps:59 76.82 617 27.64 3e-30 mol:protein length:617 1 4-alpha-glucan Branching Enzyme
blastp_pdb 1m7x_C 397 859 + 463 Gaps:59 76.82 617 27.64 3e-30 mol:protein length:617 1 4-alpha-glucan Branching Enzyme
blastp_pdb 1m7x_B 397 859 + 463 Gaps:59 76.82 617 27.64 3e-30 mol:protein length:617 1 4-alpha-glucan Branching Enzyme
blastp_pdb 1m7x_A 397 859 + 463 Gaps:59 76.82 617 27.64 3e-30 mol:protein length:617 1 4-alpha-glucan Branching Enzyme
blastp_pdb 1eha_A 395 565 + 171 Gaps:20 28.85 558 34.78 1e-13 mol:protein length:558 GLYCOSYLTREHALOSE TREHALOHYDROLASE
blastp_pdb 1eh9_A 395 565 + 171 Gaps:20 28.85 558 34.78 1e-13 mol:protein length:558 GLYCOSYLTREHALOSE TREHALOHYDROLASE
blastp_pdb 3m07_A 383 562 + 180 Gaps:14 27.51 618 32.94 4e-12 mol:protein length:618 Putative alpha amylase
blastp_uniprot_sprot sp|D2WL32|GLGB3_ARATH 1 865 + 865 Gaps:27 99.00 899 73.37 0.0 1 4-alpha-glucan-branching enzyme 3 chloroplastic/amyloplastic OS Arabidopsis thaliana GN SBE3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8NKE1|GLGB_RHIIR 329 865 + 537 Gaps:35 82.87 683 41.87 3e-147 1 4-alpha-glucan-branching enzyme OS Rhizophagus irregularis GN GLC3 PE 2 SV 1
blastp_uniprot_sprot sp|Q96VA4|GLGB_ASPOR 332 865 + 534 Gaps:35 82.00 689 42.48 4e-144 1 4-alpha-glucan-branching enzyme OS Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN gbeA PE 2 SV 1
blastp_uniprot_sprot sp|Q9D6Y9|GLGB_MOUSE 332 865 + 534 Gaps:36 80.06 702 41.99 2e-143 1 4-alpha-glucan-branching enzyme OS Mus musculus GN Gbe1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Y8H3|GLGB_EMENI 329 863 + 535 Gaps:33 82.75 684 42.05 2e-141 1 4-alpha-glucan-branching enzyme OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN be1 PE 2 SV 3
blastp_uniprot_sprot sp|Q6T308|GLGB_FELCA 335 865 + 531 Gaps:38 79.97 699 41.32 1e-139 1 4-alpha-glucan-branching enzyme OS Felis catus GN GBE1 PE 2 SV 1
blastp_uniprot_sprot sp|Q04446|GLGB_HUMAN 335 865 + 531 Gaps:36 79.63 702 41.32 1e-139 1 4-alpha-glucan-branching enzyme OS Homo sapiens GN GBE1 PE 1 SV 3
blastp_uniprot_sprot sp|Q6EAS5|GLGB_HORSE 335 865 + 531 Gaps:36 79.97 699 41.86 2e-139 1 4-alpha-glucan-branching enzyme OS Equus caballus GN GBE1 PE 2 SV 1
blastp_uniprot_sprot sp|Q757Q6|GLGB_ASHGO 335 865 + 531 Gaps:45 81.93 703 41.15 2e-138 1 4-alpha-glucan-branching enzyme OS Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN GLC3 PE 3 SV 1
blastp_uniprot_sprot sp|Q6CCT1|GLGB_YARLI 334 865 + 532 Gaps:42 83.07 691 39.20 8e-138 1 4-alpha-glucan-branching enzyme OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN GLC3 PE 3 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 340 865 526 PTHR10357 none none IPR015902
PANTHER 73 187 115 PTHR10357 none none IPR015902
PANTHER 340 865 526 PTHR10357:SF119 none none none
PANTHER 73 187 115 PTHR10357:SF119 none none none
Gene3D 387 760 374 G3DSA:3.20.20.80 none none IPR013781
SUPERFAMILY 689 770 82 SSF51445 none none IPR017853
SUPERFAMILY 340 649 310 SSF51445 none none IPR017853
Pfam 775 865 91 PF02806 "Reactome:REACT_474" Alpha amylase, C-terminal all-beta domain IPR006048
Pfam 424 497 74 PF00128 none Alpha amylase, catalytic domain IPR006047
Gene3D 770 865 96 G3DSA:2.60.40.1180 none none IPR013780
PIRSF 17 874 858 PIRSF000463 "KEGG:00500+2.4.1.18","MetaCyc:PWY-5067","MetaCyc:PWY-622","UniPathway:UPA00164" none IPR006407
SUPERFAMILY 115 200 86 SSF81296 none none IPR014756
SUPERFAMILY 770 865 96 SSF51011 none none none
Pfam 121 196 76 PF02922 none Carbohydrate-binding module 48 (Isoamylase N-terminal domain) IPR004193
Gene3D 112 184 73 G3DSA:2.60.40.10 none none IPR013783
SMART 413 769 357 SM00642 none Alpha-amylase domain IPR006589

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting