Protein : Qrob_P0530970.2 Q. robur
Protein Identifier  ? Qrob_P0530970.2 Organism . Name  Quercus robur
Score  82.3 Score Type  egn
Protein Description  (M=1) KOG0483//KOG0484//KOG0487//KOG0494//KOG0842//KOG0843//KOG0850 - Transcription factor HEX contains HOX and HALZ domains [Transcription]. // Transcription factor PHOX2/ARIX contains HOX domain [Transcription]. // Transcription factor Abd-B contains HOX domain [Transcription]. // Transcription factor CHX10 and related HOX domain proteins [General function prediction only]. // Transcription factor tinman/NKX2-3 contains HOX domain [Transcription]. // Transcription factor EMX1 and related HOX domain proteins [Transcription]. // Transcription factor DLX and related proteins with LIM Zn-binding and HOX domains [Transcription]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 744  
Kegg Orthology  K09338
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_030175 1 738 + 738 Gaps:23 99.86 720 89.71 0.0 Protodermal factor 2 isoform 1
blastp_kegg lcl|vvi:100264009 1 742 + 742 Gaps:23 99.86 726 88.14 0.0 homeobox-leucine zipper protein PROTODERMAL FACTOR 2-like
blastp_kegg lcl|cic:CICLE_v10014424mg 1 743 + 743 Gaps:36 99.58 718 89.09 0.0 hypothetical protein
blastp_kegg lcl|cit:102631422 1 743 + 743 Gaps:36 99.58 718 88.95 0.0 homeobox-leucine zipper protein MERISTEM L1-like
blastp_kegg lcl|pop:POPTR_0004s01980g 1 743 + 743 Gaps:24 100.00 725 86.34 0.0 POPTRDRAFT_758451 PROTODERMAL FACTOR2 family protein
blastp_kegg lcl|pper:PRUPE_ppa001875mg 1 741 + 741 Gaps:42 99.60 750 85.81 0.0 hypothetical protein
blastp_kegg lcl|pmum:103324503 1 741 + 741 Gaps:42 99.60 750 85.54 0.0 homeobox-leucine zipper protein PROTODERMAL FACTOR 2-like
blastp_kegg lcl|mdm:103446683 1 741 + 741 Gaps:38 99.59 740 85.35 0.0 homeobox-leucine zipper protein MERISTEM L1-like
blastp_kegg lcl|rcu:RCOM_0905400 1 743 + 743 Gaps:26 100.00 727 85.42 0.0 homeobox protein putative
blastp_kegg lcl|pop:POPTR_0011s00520g 6 742 + 737 Gaps:24 99.86 720 85.26 0.0 POPTRDRAFT_568199 PROTODERMAL FACTOR2 family protein
blastp_pdb 1ftt_A 59 117 + 59 none 86.76 68 38.98 2e-06 mol:protein length:68 THYROID TRANSCRIPTION FACTOR 1 HOMEODOMAIN
blastp_pdb 3a01_F 57 119 + 63 Gaps:1 95.52 67 32.81 3e-06 mol:protein length:67 Homeobox protein aristaless
blastp_pdb 3a01_B 57 119 + 63 Gaps:1 95.52 67 32.81 3e-06 mol:protein length:67 Homeobox protein aristaless
blastp_uniprot_sprot sp|Q8RWU4|ATML1_ARATH 1 743 + 743 Gaps:55 100.00 762 80.18 0.0 Homeobox-leucine zipper protein MERISTEM L1 OS Arabidopsis thaliana GN ATML1 PE 2 SV 1
blastp_uniprot_sprot sp|Q93V99|PDF2_ARATH 1 741 + 741 Gaps:35 99.33 743 81.71 0.0 Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS Arabidopsis thaliana GN PDF2 PE 2 SV 1
blastp_uniprot_sprot sp|Q94C37|HDG2_ARATH 1 743 + 743 Gaps:42 100.00 721 74.06 0.0 Homeobox-leucine zipper protein HDG2 OS Arabidopsis thaliana GN HDG2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6ZAR0|ROC1_ORYSJ 33 742 + 710 Gaps:40 90.05 784 76.35 0.0 Homeobox-leucine zipper protein ROC1 OS Oryza sativa subsp. japonica GN ROC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q0J9X2|ROC2_ORYSJ 30 738 + 709 Gaps:42 89.67 784 77.24 0.0 Homeobox-leucine zipper protein ROC2 OS Oryza sativa subsp. japonica GN ROC2 PE 2 SV 1
blastp_uniprot_sprot sp|A2YR02|ROC7_ORYSI 50 742 + 693 Gaps:56 88.52 749 75.87 0.0 Homeobox-leucine zipper protein ROC7 OS Oryza sativa subsp. indica GN ROC7 PE 3 SV 1
blastp_uniprot_sprot sp|A3BPF2|ROC7_ORYSJ 51 742 + 692 Gaps:56 88.38 749 75.53 0.0 Homeobox-leucine zipper protein ROC7 OS Oryza sativa subsp. japonica GN ROC7 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WV12|ANL2_ARATH 31 742 + 712 Gaps:52 87.03 802 55.87 0.0 Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS Arabidopsis thaliana GN ANL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6EPF0|ROC5_ORYSJ 31 741 + 711 Gaps:74 92.41 804 52.89 0.0 Homeobox-leucine zipper protein ROC5 OS Oryza sativa subsp. japonica GN ROC5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M2E8|HDG1_ARATH 31 742 + 712 Gaps:70 90.10 808 52.20 0.0 Homeobox-leucine zipper protein HDG1 OS Arabidopsis thaliana GN HDG1 PE 2 SV 1
rpsblast_cdd gnl|CDD|176884 244 485 + 242 Gaps:23 100.00 229 63.32 1e-102 cd08875 START_ArGLABRA2_like C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins. This subfamily includes the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of the Arabidopsis homeobox protein GLABRA 2 and related proteins. The START domain family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. Most proteins in this subgroup contain an N-terminal homeobox DNA-binding domain some contain a leucine zipper. ArGLABRA2 plays a role in the differentiation of hairless epidermal cells of the Arabidopsis root. It acts in a cell-position-dependent manner to suppress root hair formation in those cells.
rpsblast_cdd gnl|CDD|202011 249 486 + 238 Gaps:39 100.00 205 46.83 2e-50 pfam01852 START START domain.
rpsblast_cdd gnl|CDD|197591 250 486 + 237 Gaps:46 100.00 205 39.51 9e-40 smart00234 START in StAR and phosphatidylcholine transfer protein. putative lipid-binding domain in StAR and phosphatidylcholine transfer protein.
rpsblast_cdd gnl|CDD|200956 60 115 + 56 none 98.25 57 37.50 1e-16 pfam00046 Homeobox Homeobox domain.
rpsblast_cdd gnl|CDD|197696 59 115 + 57 none 100.00 57 40.35 3e-14 smart00389 HOX Homeodomain. DNA-binding factors that are involved in the transcriptional regulation of key developmental processes.
rpsblast_cdd gnl|CDD|28970 60 118 + 59 none 100.00 59 40.68 1e-13 cd00086 homeodomain Homeodomain DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes may bind to DNA as monomers or as homo- and/or heterodimers in a sequence-specific manner..
rpsblast_cdd gnl|CDD|35135 29 152 + 124 Gaps:10 73.08 156 24.56 1e-10 COG5576 COG5576 Homeodomain-containing transcription factor [Transcription].

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 244 358 115 PTHR24325:SF14 none none none
PANTHER 22 217 196 PTHR24325:SF14 none none none
PANTHER 377 743 367 PTHR24325 none none none
ProSiteProfiles 57 117 61 PS50071 none 'Homeobox' domain profile. IPR001356
SMART 249 486 238 SM00234 none in StAR and phosphatidylcholine transfer protein IPR002913
Gene3D 386 485 100 G3DSA:3.30.530.20 none none IPR023393
Pfam 249 486 238 PF01852 none START domain IPR002913
PANTHER 377 743 367 PTHR24325:SF14 none none none
SMART 58 121 64 SM00389 none Homeodomain IPR001356
PANTHER 244 358 115 PTHR24325 none none none
PANTHER 22 217 196 PTHR24325 none none none
SUPERFAMILY 507 735 229 SSF55961 none none none
Gene3D 42 115 74 G3DSA:1.10.10.60 none none IPR009057
Pfam 60 115 56 PF00046 none Homeobox domain IPR001356
ProSiteProfiles 240 489 250 PS50848 none START domain profile. IPR002913
SUPERFAMILY 46 117 72 SSF46689 none none IPR009057
SUPERFAMILY 240 488 249 SSF55961 none none none
Coils 111 147 37 Coil none none none
ProSitePatterns 92 115 24 PS00027 none 'Homeobox' domain signature. IPR017970

0 Localization

0 Qtllist

0 Targeting