Protein : Qrob_P0528390.2 Q. robur
Protein Identifier  ? Qrob_P0528390.2 Organism . Name  Quercus robur
Score  99.3 Score Type  egn
Protein Description  (M=3) PTHR13878:SF14 - PREDICTED: SIMILAR TO L-GULONO-GAMMA-LACTONE OXIDASE Code Enzyme  EC:1.5.99.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 536  
Kegg Orthology  K00279
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0 Synonyms

8 GO Terms

Identifier Name Description
GO:0016491 oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity Catalysis of the reaction: UDP-N-acetylmuramate + NADP+ = UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine + NADPH + H+.
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
GO:0009690 cytokinin metabolic process The chemical reactions and pathways involving cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators.
GO:0019139 cytokinin dehydrogenase activity Catalysis of the reaction: N6-dimethylallyladenine + acceptor + H2O = adenine + 3-methylbut-2-enal + reduced electron acceptor.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa003895mg 1 534 + 534 Gaps:4 98.15 542 81.95 0.0 hypothetical protein
blastp_kegg lcl|mdm:103440288 1 526 + 526 Gaps:7 96.84 538 84.07 0.0 cytokinin dehydrogenase 5-like
blastp_kegg lcl|rcu:RCOM_1595810 1 534 + 534 Gaps:20 99.63 540 79.93 0.0 gulonolactone oxidase putative (EC:1.5.99.12)
blastp_kegg lcl|pmum:103321322 1 524 + 524 Gaps:4 96.13 543 81.99 0.0 cytokinin dehydrogenase 5
blastp_kegg lcl|vvi:100267760 5 526 + 522 Gaps:9 98.28 524 83.30 0.0 cytokinin dehydrogenase 5-like
blastp_kegg lcl|fve:101310777 1 533 + 533 Gaps:7 99.07 535 80.38 0.0 cytokinin dehydrogenase 5-like
blastp_kegg lcl|cic:CICLE_v10000709mg 3 530 + 528 Gaps:5 92.13 572 80.46 0.0 hypothetical protein
blastp_kegg lcl|cit:102628616 3 530 + 528 Gaps:5 92.13 572 80.27 0.0 cytokinin dehydrogenase 5-like
blastp_kegg lcl|mdm:103450431 1 524 + 524 Gaps:7 96.47 538 82.08 0.0 cytokinin dehydrogenase 5-like
blastp_kegg lcl|pop:POPTR_0002s03190g 3 534 + 532 Gaps:20 99.44 535 80.45 0.0 POPTRDRAFT_754101 cytokinin oxidase 6 family protein
blastp_pdb 3dq0_A 25 525 + 501 Gaps:25 96.90 516 49.00 6e-159 mol:protein length:516 Cytokinin dehydrogenase 1
blastp_pdb 3c0p_A 25 525 + 501 Gaps:25 96.90 516 49.00 6e-159 mol:protein length:516 Cytokinin dehydrogenase 1
blastp_pdb 3bw7_A 25 525 + 501 Gaps:25 96.90 516 49.00 6e-159 mol:protein length:516 Cytokinin dehydrogenase 1
blastp_pdb 2qkn_A 25 525 + 501 Gaps:25 96.90 516 49.00 6e-159 mol:protein length:516 Cytokinin dehydrogenase 1
blastp_pdb 1w1s_A 25 525 + 501 Gaps:25 93.63 534 49.00 2e-158 mol:protein length:534 CYTOKININ DEHYDROGENASE
blastp_pdb 1w1r_A 25 525 + 501 Gaps:25 93.63 534 49.00 2e-158 mol:protein length:534 CYTOKININ DEHYDROGENASE 1
blastp_pdb 1w1q_A 25 525 + 501 Gaps:25 93.63 534 49.00 2e-158 mol:protein length:534 CYTOKININ DEHYDROGENASE 1
blastp_pdb 1w1o_A 25 525 + 501 Gaps:25 93.63 534 49.00 2e-158 mol:protein length:534 CYTOKININ DEHYDROGENASE 1
blastp_pdb 3kjm_A 25 525 + 501 Gaps:25 96.90 516 48.80 4e-158 mol:protein length:516 Cytokinin dehydrogenase 1
blastp_pdb 2qpm_A 25 525 + 501 Gaps:25 96.90 516 48.80 4e-158 mol:protein length:516 Cytokinin dehydrogenase 1
blastp_uniprot_sprot sp|Q67YU0|CKX5_ARATH 1 525 + 525 Gaps:18 95.74 540 73.31 0.0 Cytokinin dehydrogenase 5 OS Arabidopsis thaliana GN CKX5 PE 2 SV 1
blastp_uniprot_sprot sp|Q5ZAY9|CKX5_ORYSJ 1 524 + 524 Gaps:13 98.31 534 66.48 0.0 Cytokinin dehydrogenase 5 OS Oryza sativa subsp. japonica GN CKX5 PE 2 SV 1
blastp_uniprot_sprot sp|Q75K78|CKX9_ORYSJ 25 525 + 501 Gaps:26 92.32 521 56.76 0.0 Cytokinin dehydrogenase 9 OS Oryza sativa subsp. japonica GN CKX9 PE 2 SV 1
blastp_uniprot_sprot sp|O22213|CKX1_ARATH 26 525 + 500 Gaps:22 84.17 575 56.40 0.0 Cytokinin dehydrogenase 1 OS Arabidopsis thaliana GN CKX1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LY71|CKX6_ARATH 26 529 + 504 Gaps:19 92.12 533 55.19 0.0 Cytokinin dehydrogenase 6 OS Arabidopsis thaliana GN CKX6 PE 2 SV 2
blastp_uniprot_sprot sp|Q5JLP4|CKX4_ORYSJ 31 524 + 494 Gaps:20 90.74 529 54.79 0.0 Cytokinin dehydrogenase 4 OS Oryza sativa subsp. japonica GN CKX4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LTS3|CKX3_ARATH 35 525 + 491 Gaps:22 90.44 523 51.37 2e-168 Cytokinin dehydrogenase 3 OS Arabidopsis thaliana GN CKX3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FUJ2|CKX4_ARATH 3 525 + 523 Gaps:42 99.81 524 48.18 4e-163 Cytokinin dehydrogenase 4 OS Arabidopsis thaliana GN CKX4 PE 1 SV 2
blastp_uniprot_sprot sp|Q6YW50|CKX7_ORYSJ 7 534 + 528 Gaps:23 98.28 524 49.90 6e-161 Cytokinin dehydrogenase 7 OS Oryza sativa subsp. japonica GN CKX7 PE 3 SV 1
blastp_uniprot_sprot sp|Q6YW51|CKX6_ORYSJ 7 524 + 518 Gaps:20 96.39 527 49.21 7e-160 Cytokinin dehydrogenase 6 OS Oryza sativa subsp. japonica GN CKX6 PE 3 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 240 524 285 PF09265 "KEGG:00908+1.5.99.12" Cytokinin dehydrogenase 1, FAD and cytokinin binding IPR015345
PANTHER 11 524 514 PTHR13878:SF14 none none none
ProSitePatterns 59 94 36 PS00862 none Oxygen oxidoreductases covalent FAD-binding site. IPR006093
Gene3D 129 237 109 G3DSA:3.30.465.10 none none IPR016169
SUPERFAMILY 34 238 205 SSF56176 none none IPR016166
Phobius 23 535 513 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 18 22 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 242 483 242 G3DSA:3.40.462.10 "KEGG:00908+1.5.99.12" none IPR016170
Pfam 59 208 150 PF01565 "KEGG:00520+1.3.1.98","KEGG:00550+1.3.1.98","MetaCyc:PWY-6386","MetaCyc:PWY-6387","UniPathway:UPA00219" FAD binding domain IPR006094
Gene3D 56 113 58 G3DSA:3.30.43.10 none none IPR016167
Phobius 6 17 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 11 524 514 PTHR13878 none none none
SUPERFAMILY 240 524 285 SSF55103 none none IPR016164
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
ProSiteProfiles 55 239 185 PS51387 none PCMH-type FAD-binding domain profile. IPR016166

1 Localization

Analysis Start End Length
SignalP_EUK 1 22 21

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting