Protein : Qrob_P0522970.2 Q. robur
Protein Identifier  ? Qrob_P0522970.2 Organism . Name  Quercus robur
Score  51.0 Score Type  egn
Protein Description  (M=1) PTHR10252:SF8 - TRANSCRIPTIONAL ACTIVATOR HAP5 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 240  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0046982 protein heterodimerization activity Interacting selectively and non-covalently with a nonidentical protein to form a heterodimer.
GO:0016602 CCAAT-binding factor complex A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; functions as both an activator and a repressor, depending on its interacting cofactors. Typically trimeric consisting of NFYA, NFYB and NFYC subunits. In Saccharomyces, it activates the transcription of genes in response to growth in a nonfermentable carbon source and consists of four known subunits: HAP2, HAP3, HAP4 and HAP5.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0003s12460g 124 235 + 112 Gaps:3 98.29 117 70.43 1e-50 POPTRDRAFT_415533 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1686190 124 228 + 105 Gaps:3 92.31 117 72.22 3e-49 ccaat-binding transcription factor putative
blastp_kegg lcl|tcc:TCM_016221 124 237 + 114 Gaps:4 96.72 122 71.19 3e-49 Nuclear transcription factor Y subunit C-9
blastp_kegg lcl|pop:POPTR_0001s09100g 124 236 + 113 Gaps:4 97.46 118 71.30 3e-48 POPTRDRAFT_843589 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa016795mg 124 237 + 114 Gaps:4 97.52 121 70.34 3e-48 hypothetical protein
blastp_kegg lcl|fve:101304388 124 228 + 105 Gaps:4 88.62 123 73.39 7e-48 nuclear transcription factor Y subunit C-9-like
blastp_kegg lcl|pvu:PHAVU_010G102300g 124 237 + 114 Gaps:7 99.18 122 66.94 2e-47 hypothetical protein
blastp_kegg lcl|pmum:103337511 124 237 + 114 Gaps:4 97.52 121 69.49 4e-47 nuclear transcription factor Y subunit C-3-like
blastp_kegg lcl|vvi:100266714 124 223 + 100 Gaps:3 88.79 116 71.84 7e-47 nuclear transcription factor Y subunit C-3-like
blastp_kegg lcl|gmx:100777614 124 225 + 102 Gaps:3 85.37 123 70.48 1e-46 nuclear transcription factor Y subunit C-1-like
blastp_pdb 1n1j_B 144 220 + 77 Gaps:1 78.35 97 53.95 1e-18 mol:protein length:97 NF-YC
blastp_uniprot_sprot sp|Q9ZVL3|NFYC3_ARATH 142 220 + 79 Gaps:1 35.94 217 62.82 1e-23 Nuclear transcription factor Y subunit C-3 OS Arabidopsis thaliana GN NFYC3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LCG7|NFYC2_ARATH 142 220 + 79 Gaps:1 39.20 199 58.97 2e-23 Nuclear transcription factor Y subunit C-2 OS Arabidopsis thaliana GN NFYC2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FMV5|NFYC4_ARATH 142 220 + 79 Gaps:1 31.20 250 61.54 3e-23 Nuclear transcription factor Y subunit C-4 OS Arabidopsis thaliana GN NFYC4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SMP0|NFYC1_ARATH 142 220 + 79 Gaps:1 33.33 234 61.54 3e-23 Nuclear transcription factor Y subunit C-1 OS Arabidopsis thaliana GN NFYC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8L4B2|NFYC9_ARATH 142 220 + 79 Gaps:1 33.77 231 62.82 3e-23 Nuclear transcription factor Y subunit C-9 OS Arabidopsis thaliana GN NFYC9 PE 2 SV 1
blastp_uniprot_sprot sp|Q02516|HAP5_YEAST 142 220 + 79 Gaps:1 32.23 242 52.56 1e-21 Transcriptional activator HAP5 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN HAP5 PE 1 SV 1
blastp_uniprot_sprot sp|Q557I1|NFYC_DICDI 142 220 + 79 Gaps:1 11.40 684 51.28 7e-19 Nuclear transcription factor Y subunit gamma OS Dictyostelium discoideum GN nfyc-1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FGP7|NFYC6_ARATH 144 225 + 82 Gaps:1 40.10 202 50.62 1e-18 Nuclear transcription factor Y subunit C-6 OS Arabidopsis thaliana GN NFYC6 PE 2 SV 1
blastp_uniprot_sprot sp|Q62725|NFYC_RAT 144 220 + 77 Gaps:1 22.69 335 53.95 1e-17 Nuclear transcription factor Y subunit gamma OS Rattus norvegicus GN Nfyc PE 2 SV 1
blastp_uniprot_sprot sp|P70353|NFYC_MOUSE 144 220 + 77 Gaps:1 22.69 335 53.95 1e-17 Nuclear transcription factor Y subunit gamma OS Mus musculus GN Nfyc PE 2 SV 2
rpsblast_cdd gnl|CDD|34805 142 226 + 85 Gaps:1 29.37 286 48.81 7e-20 COG5208 HAP5 CCAAT-binding factor subunit C [Transcription].
rpsblast_cdd gnl|CDD|201453 144 206 + 63 Gaps:1 95.38 65 33.87 2e-12 pfam00808 CBFD_NFYB_HMF Histone-like transcription factor (CBF/NF-Y) and archaeal histone. This family includes archaebacterial histones and histone like transcription factors from eukaryotes.
rpsblast_kog gnl|CDD|36870 85 233 + 149 Gaps:7 60.17 236 36.62 5e-20 KOG1657 KOG1657 KOG1657 CCAAT-binding factor subunit C (HAP5) [Transcription].
rpsblast_kog gnl|CDD|36872 144 222 + 79 Gaps:1 34.82 224 33.33 2e-08 KOG1659 KOG1659 KOG1659 Class 2 transcription repressor NC2 alpha subunit (DRAP1) [Transcription].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 139 203 65 G3DSA:1.10.20.10 none none IPR009072
Pfam 144 205 62 PF00808 none Histone-like transcription factor (CBF/NF-Y) and archaeal histone IPR003958
PANTHER 142 220 79 PTHR10252 none none none
SUPERFAMILY 138 216 79 SSF47113 none none IPR009072
PANTHER 142 220 79 PTHR10252:SF8 none none IPR027170

0 Localization

0 Qtllist

0 Targeting