Protein : Qrob_P0520530.2 Q. robur
Protein Identifier  ? Qrob_P0520530.2 Organism . Name  Quercus robur
Score  83.2 Score Type  egn
Protein Description  (M=2) K08956 - AFG3 family protein [EC:3.4.24.-] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 822  
Kegg Orthology  K08956
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0004222 metalloendopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_021912 1 821 + 821 Gaps:8 100.00 817 84.09 0.0 Cell division protease ftsH isoform 1
blastp_kegg lcl|cic:CICLE_v10011087mg 1 820 + 820 Gaps:11 99.88 818 83.48 0.0 hypothetical protein
blastp_kegg lcl|cit:102612679 1 820 + 820 Gaps:11 99.88 818 83.35 0.0 ATP-dependent zinc metalloprotease FTSH 8 mitochondrial-like
blastp_kegg lcl|pmum:103339259 1 821 + 821 Gaps:7 100.00 816 81.86 0.0 ATP-dependent zinc metalloprotease FTSH 10 mitochondrial-like
blastp_kegg lcl|pop:POPTR_0016s10620g 1 821 + 821 Gaps:11 100.00 814 82.06 0.0 POPTRDRAFT_808632 hypothetical protein
blastp_kegg lcl|pxb:103937202 1 819 + 819 Gaps:13 99.63 815 81.53 0.0 ATP-dependent zinc metalloprotease FTSH 10 mitochondrial-like
blastp_kegg lcl|pxb:103930924 1 819 + 819 Gaps:13 99.63 815 81.28 0.0 ATP-dependent zinc metalloprotease FTSH 10 mitochondrial-like
blastp_kegg lcl|pxb:103930923 1 819 + 819 Gaps:13 99.63 815 81.28 0.0 ATP-dependent zinc metalloprotease FTSH 10 mitochondrial-like
blastp_kegg lcl|mdm:103433429 1 819 + 819 Gaps:13 99.63 815 81.16 0.0 ATP-dependent zinc metalloprotease FTSH 10 mitochondrial-like
blastp_kegg lcl|pper:PRUPE_ppa001525mg 1 821 + 821 Gaps:15 100.00 808 82.30 0.0 hypothetical protein
blastp_pdb 2cea_F 331 773 + 443 Gaps:10 93.91 476 48.99 3e-144 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_E 331 773 + 443 Gaps:10 93.91 476 48.99 3e-144 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_D 331 773 + 443 Gaps:10 93.91 476 48.99 3e-144 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_C 331 773 + 443 Gaps:10 93.91 476 48.99 3e-144 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_B 331 773 + 443 Gaps:10 93.91 476 48.99 3e-144 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2cea_A 331 773 + 443 Gaps:10 93.91 476 48.99 3e-144 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_F 331 773 + 443 Gaps:10 93.91 476 48.99 3e-144 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_E 331 773 + 443 Gaps:10 93.91 476 48.99 3e-144 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_D 331 773 + 443 Gaps:10 93.91 476 48.99 3e-144 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_pdb 2ce7_C 331 773 + 443 Gaps:10 93.91 476 48.99 3e-144 mol:protein length:476 CELL DIVISION PROTEIN FTSH
blastp_uniprot_sprot sp|Q8VZI8|FTSHA_ARATH 1 820 + 820 Gaps:28 99.88 813 74.88 0.0 ATP-dependent zinc metalloprotease FTSH 10 mitochondrial OS Arabidopsis thaliana GN FTSH10 PE 1 SV 1
blastp_uniprot_sprot sp|Q0DHL4|FTSH8_ORYSJ 77 820 + 744 Gaps:4 90.51 822 78.76 0.0 ATP-dependent zinc metalloprotease FTSH 8 mitochondrial OS Oryza sativa subsp. japonica GN FTSH8 PE 3 SV 1
blastp_uniprot_sprot sp|Q84WU8|FTSH3_ARATH 1 820 + 820 Gaps:23 99.51 809 75.53 0.0 ATP-dependent zinc metalloprotease FTSH 3 mitochondrial OS Arabidopsis thaliana GN FTSH3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8S2A7|FTSH3_ORYSJ 1 812 + 812 Gaps:41 99.13 802 71.45 0.0 ATP-dependent zinc metalloprotease FTSH 3 mitochondrial OS Oryza sativa subsp. japonica GN FTSH3 PE 3 SV 1
blastp_uniprot_sprot sp|P40341|YTA12_YEAST 166 793 + 628 Gaps:28 72.73 825 55.83 0.0 Mitochondrial respiratory chain complexes assembly protein YTA12 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN YTA12 PE 1 SV 2
blastp_uniprot_sprot sp|Q9Y4W6|AFG32_HUMAN 150 797 + 648 Gaps:39 78.17 797 57.30 0.0 AFG3-like protein 2 OS Homo sapiens GN AFG3L2 PE 1 SV 2
blastp_uniprot_sprot sp|Q8JZQ2|AFG32_MOUSE 151 797 + 647 Gaps:42 76.43 802 58.40 0.0 AFG3-like protein 2 OS Mus musculus GN Afg3l2 PE 1 SV 1
blastp_uniprot_sprot sp|Q2KJI7|AFG32_BOVIN 146 797 + 652 Gaps:38 77.27 805 57.40 0.0 AFG3-like protein 2 OS Bos taurus GN AFG3L2 PE 2 SV 1
blastp_uniprot_sprot sp|P39925|AFG3_YEAST 148 777 + 630 Gaps:39 81.08 761 54.78 0.0 Mitochondrial respiratory chain complexes assembly protein AFG3 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN AFG3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9HGM3|YTA12_SCHPO 151 776 + 626 Gaps:40 77.36 773 55.52 0.0 Mitochondrial respiratory chain complexes assembly protein rca1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN yta12 PE 3 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 588 778 191 SSF140990 none none none
SMART 367 507 141 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SUPERFAMILY 331 578 248 SSF52540 none none IPR027417
Phobius 1 142 142 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 94 803 710 PTHR23076 none none none
Hamap 9 786 778 MF_01458 none ATP-dependent zinc metalloprotease FtsH [ftsH]. IPR005936
ProSitePatterns 475 493 19 PS00674 none AAA-protein family signature. IPR003960
Phobius 163 821 659 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 567 770 204 PF01434 none Peptidase family M41 IPR000642
Phobius 143 162 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 372 504 133 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
Gene3D 515 581 67 G3DSA:1.10.8.60 none none none
TIGRFAM 272 771 500 TIGR01241 none FtsH_fam: ATP-dependent metallopeptidase HflB IPR005936
PANTHER 94 803 710 PTHR23076:SF50 none none none
Gene3D 331 514 184 G3DSA:3.40.50.300 none none IPR027417
Pfam 150 259 110 PF06480 none FtsH Extracellular IPR011546

0 Localization

0 Qtllist

0 Targeting